| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966470
Identifier: 123966470
GI number: 123966470
Start: 1091538
End: 1091825
Strand: Reverse
Name: 123966470
Synonym: P9515_12371
Alternate gene names: NA
Gene position: 1091825-1091538 (Counterclockwise)
Preceding gene: 123966475
Following gene: 123966469
Centisome position: 64.07
GC content: 28.82
Gene sequence:
>288_bases ATGGCTAAGAAAGAATTTAAAAAAGTTTTAAACTTAAACTCCTATGAATGGTGGAGAAATCATAGGAAATTAATAACTTT TGGTTTGTTCCTATTTATTTTTACTTTTTATCTCAGAACTCCTTTTGATAAAGAATCAGAAGTAAAAGATACCTGCGCGA AACTAAATTCAAGCTATCAAATCACAGGCGATGAAGCGATAAAGAAGCTTAATTTAAAGGAAATAAAAAATTATGATAAT CGCGAGTTAGCCAACTACTACTGTGAGAGATATTTAGGTATTAAATAA
Upstream 100 bases:
>100_bases AGTATTTGATTTCATTTTAAATGTGTGGCAAATAAATTTCGAAATATAAGATCCATTTTTTGACAGTCGATTTAATATAG ATGTAAACCCTCTCTTTTTT
Downstream 100 bases:
>100_bases GAAAAAATGAAACGCTTACTACTCACATCGATATTTCCAATTAAAGTACTAAGAATTTATTTTTTATTTAATGTCTAAAG GATTTTGGCTCGTAACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MAKKEFKKVLNLNSYEWWRNHRKLITFGLFLFIFTFYLRTPFDKESEVKDTCAKLNSSYQITGDEAIKKLNLKEIKNYDN RELANYYCERYLGIK
Sequences:
>Translated_95_residues MAKKEFKKVLNLNSYEWWRNHRKLITFGLFLFIFTFYLRTPFDKESEVKDTCAKLNSSYQITGDEAIKKLNLKEIKNYDN RELANYYCERYLGIK >Mature_94_residues AKKEFKKVLNLNSYEWWRNHRKLITFGLFLFIFTFYLRTPFDKESEVKDTCAKLNSSYQITGDEAIKKLNLKEIKNYDNR ELANYYCERYLGIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11547; Mature: 11416
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKEFKKVLNLNSYEWWRNHRKLITFGLFLFIFTFYLRTPFDKESEVKDTCAKLNSSYQ CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCE ITGDEAIKKLNLKEIKNYDNRELANYYCERYLGIK ECHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AKKEFKKVLNLNSYEWWRNHRKLITFGLFLFIFTFYLRTPFDKESEVKDTCAKLNSSYQ CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCE ITGDEAIKKLNLKEIKNYDNRELANYYCERYLGIK ECHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA