| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123966475
Identifier: 123966475
GI number: 123966475
Start: 1095004
End: 1095429
Strand: Reverse
Name: 123966475
Synonym: P9515_12421
Alternate gene names: NA
Gene position: 1095429-1095004 (Counterclockwise)
Preceding gene: 123966476
Following gene: 123966470
Centisome position: 64.28
GC content: 35.92
Gene sequence:
>426_bases ATGATCAAGAATTTATTCATAGCATTAGTTTTTGCATTAATGCTTATTAACCCAAATATTACTATCGCTGCAGAATCTCC TGTTGATGTTCAAGAAATTTTCACCTCTTCAAAAAATATTGATGGTGATAATTTTAAGTATCCAAAAGGAAAAGCTGAAA TGCGTTTGATTAGAGTAGAAGTTGAAAATGGAGCAACTATACCAATACATTCTCATCCAGCTCCTTTACTAGGTCATATT GAAAGCGGTGAATTAACGCTTGCTGAAAAGAAAGGGATTAGTAAAACCTTTAAGGAAGGAGATTCATTTGTTCTCTCAGC AAATACTCCCGCTCACACAATGGCTAATAATGGTGATTCTTCAGCAGTTATGTGGGTTGCTGTGGCTTCAGTAGAAGGTG TACCTACTTTGACCCCGGAAGAATAA
Upstream 100 bases:
>100_bases ACAGTCAACTAACAAAAAATTAAATAGTTAAATCAAATACTGACAGATATTTAAAAAATAAATAACATAAGTCTAAATAA TTTTCTATAAATTCAAATTC
Downstream 100 bases:
>100_bases ATAAAACTGATTTGGATTCGATCTAAACTGAGAGGGATAAACCCCTCTTTTTTATTGTGCTAATTCTACTTTGGTCTATA TGTGGTTTCCTCTGTACATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MIKNLFIALVFALMLINPNITIAAESPVDVQEIFTSSKNIDGDNFKYPKGKAEMRLIRVEVENGATIPIHSHPAPLLGHI ESGELTLAEKKGISKTFKEGDSFVLSANTPAHTMANNGDSSAVMWVAVASVEGVPTLTPEE
Sequences:
>Translated_141_residues MIKNLFIALVFALMLINPNITIAAESPVDVQEIFTSSKNIDGDNFKYPKGKAEMRLIRVEVENGATIPIHSHPAPLLGHI ESGELTLAEKKGISKTFKEGDSFVLSANTPAHTMANNGDSSAVMWVAVASVEGVPTLTPEE >Mature_141_residues MIKNLFIALVFALMLINPNITIAAESPVDVQEIFTSSKNIDGDNFKYPKGKAEMRLIRVEVENGATIPIHSHPAPLLGHI ESGELTLAEKKGISKTFKEGDSFVLSANTPAHTMANNGDSSAVMWVAVASVEGVPTLTPEE
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15145; Mature: 15145
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNLFIALVFALMLINPNITIAAESPVDVQEIFTSSKNIDGDNFKYPKGKAEMRLIRVE CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE VENGATIPIHSHPAPLLGHIESGELTLAEKKGISKTFKEGDSFVLSANTPAHTMANNGDS CCCCCEEEECCCCCCEEEECCCCCEEEECCCCCHHHHCCCCCEEEECCCCCCCCCCCCCC SAVMWVAVASVEGVPTLTPEE CEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MIKNLFIALVFALMLINPNITIAAESPVDVQEIFTSSKNIDGDNFKYPKGKAEMRLIRVE CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE VENGATIPIHSHPAPLLGHIESGELTLAEKKGISKTFKEGDSFVLSANTPAHTMANNGDS CCCCCEEEECCCCCCEEEECCCCCEEEECCCCCHHHHCCCCCEEEECCCCCCCCCCCCCC SAVMWVAVASVEGVPTLTPEE CEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA