| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is ybbP [H]
Identifier: 123966415
GI number: 123966415
Start: 1039132
End: 1039992
Strand: Direct
Name: ybbP [H]
Synonym: P9515_11821
Alternate gene names: 123966415
Gene position: 1039132-1039992 (Clockwise)
Preceding gene: 123966414
Following gene: 123966416
Centisome position: 60.98
GC content: 32.75
Gene sequence:
>861_bases GTGAATTTTTGGGGGTTTATAAACTTAAAGTTTTTATTAGATGTATTATTTGCAGCTGGATTTGGACTTTTATTATTCTC AAGAGTTAAAGAACAAAGAACGTTATGGCTTTTGAGAGGATATTTATTTTTAGTTTCTTTTGCTTGGTTTATTCAAAGAT ATGCTTATCTTCCACTAACGTCAAAATTAATTGATGCAGTTGTTCTTGCTTGTTCTTTATCTTTAGCAATTCTTTGGCAA GGAGAGCTTAGAAGATTGATGGAATTACTCGGTACTGGTAGGTTGGCGGTATTACTAGGAAATCCACCTAAAGAATTTAG AGCTACATCTACAACAGTTAATCAGTTAGTTGATGCAGCAGGAAAACTATCTCAAAATAGAAAAGGAGCTTTAATAGTTG TAGATTTAGGATGCGATTTAAGACCTGAAGATTTTTTATATTCAGGTATAAATATTGAAGCGCAATTGTCTACTGATCTT TTAATAAACTTATTTGCAACAGATACCCCATTACATGATGGAGCTGTTTTGGTAAAAGGGAATAAAATAATTTCAGCTGG AGTAATACTTCCTCTATCTCGGCAAGGGATTAGTCGATACGGCACGAGACATTTAGCTGCATTGGGAATAACAGAAAGAT TCGACAGATGTATATGCATTGTAGTTTCAGAAGAAACAGGTACTTTGTCATTAGCTAATCAAGGAAAACTTGAAAGACCT ATTACAAGTAGTCGATTGCAGGAGCTTCTCATAAAATTTGTAGGTAATCCAAAATCATCTGCAAACAAAAGCACTTTTTC CCAAAATATAAATACGAGTGATAATATTACTATTGAAAACGATTCAAATAAATCAGATTAA
Upstream 100 bases:
>100_bases TCAAAAAAGAGAAAGTCCACATGATCTTCTTAAAAACGATGTCTTACCCGATCGCTTTATCAATCAAAGTTAGGTACATT TAAATAAATTAAATTTTAAT
Downstream 100 bases:
>100_bases AGATTAATTCATGAGATCGCAAAAAATATCAACTAAAGAAAATTCAAAATTATCTAATGAAATAGATAAACTTCGAGTAC CGAAGCACATTGCAATAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNFWGFINLKFLLDVLFAAGFGLLLFSRVKEQRTLWLLRGYLFLVSFAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ GELRRLMELLGTGRLAVLLGNPPKEFRATSTTVNQLVDAAGKLSQNRKGALIVVDLGCDLRPEDFLYSGINIEAQLSTDL LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP ITSSRLQELLIKFVGNPKSSANKSTFSQNINTSDNITIENDSNKSD
Sequences:
>Translated_286_residues MNFWGFINLKFLLDVLFAAGFGLLLFSRVKEQRTLWLLRGYLFLVSFAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ GELRRLMELLGTGRLAVLLGNPPKEFRATSTTVNQLVDAAGKLSQNRKGALIVVDLGCDLRPEDFLYSGINIEAQLSTDL LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP ITSSRLQELLIKFVGNPKSSANKSTFSQNINTSDNITIENDSNKSD >Mature_286_residues MNFWGFINLKFLLDVLFAAGFGLLLFSRVKEQRTLWLLRGYLFLVSFAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ GELRRLMELLGTGRLAVLLGNPPKEFRATSTTVNQLVDAAGKLSQNRKGALIVVDLGCDLRPEDFLYSGINIEAQLSTDL LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP ITSSRLQELLIKFVGNPKSSANKSTFSQNINTSDNITIENDSNKSD
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 31609; Mature: 31609
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFWGFINLKFLLDVLFAAGFGLLLFSRVKEQRTLWLLRGYLFLVSFAWFIQRYAYLPLT CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SKLIDAVVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPPKEFRATSTTVNQLVDAA HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH GKLSQNRKGALIVVDLGCDLRPEDFLYSGINIEAQLSTDLLINLFATDTPLHDGAVLVKG HHHCCCCCCEEEEEECCCCCCCHHHEECCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC NKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP CEEEECCEEEEECHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCC ITSSRLQELLIKFVGNPKSSANKSTFSQNINTSDNITIENDSNKSD CHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MNFWGFINLKFLLDVLFAAGFGLLLFSRVKEQRTLWLLRGYLFLVSFAWFIQRYAYLPLT CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SKLIDAVVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPPKEFRATSTTVNQLVDAA HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH GKLSQNRKGALIVVDLGCDLRPEDFLYSGINIEAQLSTDLLINLFATDTPLHDGAVLVKG HHHCCCCCCEEEEEECCCCCCCHHHEECCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC NKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP CEEEECCEEEEECHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCC ITSSRLQELLIKFVGNPKSSANKSTFSQNINTSDNITIENDSNKSD CHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]