Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is cdsA [H]

Identifier: 123966408

GI number: 123966408

Start: 1031015

End: 1031872

Strand: Direct

Name: cdsA [H]

Synonym: P9515_11751

Alternate gene names: 123966408

Gene position: 1031015-1031872 (Clockwise)

Preceding gene: 123966407

Following gene: 123966414

Centisome position: 60.5

GC content: 31.93

Gene sequence:

>858_bases
ATGAGATTGCGAAGTGGTTTACTAATCGGATTATTTGGGTTAGTAGTTGTGTTATTAGGAGGATGGTTTTTCACAATAGC
AATCGTATTACTTACTTATATTGCACTACTCGAATTTTTTAGAATGGCTGAATTCACTGGAATAAAACCAGCCACTAAAA
CTACATTATTTTCATGTTTCATAATTACGATCTCAACATATCTAGAAACTATCGGATTCCTTGATAGAGAAATATACAAT
TCGATATTACCCATGTGTTCAGTTGGAATATGTACATGGTTACTGCTTCAGCCAAAGTCAGGGACTATTTCTGATATCGC
AGCATCTATTTTTGGCTTGTTTTACTTAGGTTTTTTACCTAGTTATTGGATTAAATTAAGAGCAATTGAATCGACTATGG
ATAATTTGTCAGAGGGAATATTATCGTTCGAAAGCTTCTCTAATTCCACAGGTCTCTATCTAACATTAATTTCTTGCTTG
TTAATAGTGGCGAGTGATATTGGTTCTTATTTTATTGGCAAGTCATTTGGGAAAAAGGCCCTTTCTCCCATATCCCCAAG
TAAAACTCTCGAAGGTTTGATAGGAGGAATAATATGTTCAATTTTAGTCGCAACTTTTTTTGGTTTTTTACTTAATTGGC
AAAATCCAATTTTAATTGGAATATTGTATGGAATGTTAGTTTCACTTATGGCTTTAGTAGGGGATTTAATCGAATCAATG
ATGAAAAGAGATGCAAAAATAAAAGATTCTGGAACTTTTTTACCTGGTCATGGTGGCATTCTTGATAGAATTGATAGTTA
TATTTTCACCCCATCAGTTATCTATTATATAATTATAATTTTAAAGTATTTTAGTTAA

Upstream 100 bases:

>100_bases
AATAGATAAAGAAAGAATAGATTGGATAGAAACTCAAAGTTTATATAACCAAGATCTGTTAAATTCTTATATAAGGGTCC
TACATAACTAGAAATTCAAT

Downstream 100 bases:

>100_bases
TCATCAAAAATTACTTTTGATGATAAATCTACATTTATTACTTCATTTTTAATATTGCAGTAATTAACTTTAATATTTTT
ATCTAAAGGTAGGAATATCT

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRLRSGLLIGLFGLVVVLLGGWFFTIAIVLLTYIALLEFFRMAEFTGIKPATKTTLFSCFIITISTYLETIGFLDREIYN
SILPMCSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRAIESTMDNLSEGILSFESFSNSTGLYLTLISCL
LIVASDIGSYFIGKSFGKKALSPISPSKTLEGLIGGIICSILVATFFGFLLNWQNPILIGILYGMLVSLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVIYYIIIILKYFS

Sequences:

>Translated_285_residues
MRLRSGLLIGLFGLVVVLLGGWFFTIAIVLLTYIALLEFFRMAEFTGIKPATKTTLFSCFIITISTYLETIGFLDREIYN
SILPMCSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRAIESTMDNLSEGILSFESFSNSTGLYLTLISCL
LIVASDIGSYFIGKSFGKKALSPISPSKTLEGLIGGIICSILVATFFGFLLNWQNPILIGILYGMLVSLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVIYYIIIILKYFS
>Mature_285_residues
MRLRSGLLIGLFGLVVVLLGGWFFTIAIVLLTYIALLEFFRMAEFTGIKPATKTTLFSCFIITISTYLETIGFLDREIYN
SILPMCSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRAIESTMDNLSEGILSFESFSNSTGLYLTLISCL
LIVASDIGSYFIGKSFGKKALSPISPSKTLEGLIGGIICSILVATFFGFLLNWQNPILIGILYGMLVSLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVIYYIIIILKYFS

Specific function: Unknown

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=116, Percent_Identity=47.4137931034483, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI87081696, Length=133, Percent_Identity=39.0977443609023, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 31427; Mature: 31427

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRSGLLIGLFGLVVVLLGGWFFTIAIVLLTYIALLEFFRMAEFTGIKPATKTTLFSCF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IITISTYLETIGFLDREIYNSILPMCSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SYWIKLRAIESTMDNLSEGILSFESFSNSTGLYLTLISCLLIVASDIGSYFIGKSFGKKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPISPSKTLEGLIGGIICSILVATFFGFLLNWQNPILIGILYGMLVSLMALVGDLIESM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVIYYIIIILKYFS
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLRSGLLIGLFGLVVVLLGGWFFTIAIVLLTYIALLEFFRMAEFTGIKPATKTTLFSCF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IITISTYLETIGFLDREIYNSILPMCSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SYWIKLRAIESTMDNLSEGILSFESFSNSTGLYLTLISCLLIVASDIGSYFIGKSFGKKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPISPSKTLEGLIGGIICSILVATFFGFLLNWQNPILIGILYGMLVSLMALVGDLIESM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVIYYIIIILKYFS
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]