Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965988

Identifier: 123965988

GI number: 123965988

Start: 682417

End: 683214

Strand: Reverse

Name: 123965988

Synonym: P9515_07531

Alternate gene names: NA

Gene position: 683214-682417 (Counterclockwise)

Preceding gene: 123965990

Following gene: 123965986

Centisome position: 40.09

GC content: 33.33

Gene sequence:

>798_bases
ATGCATTCAAAGATTAACTATTTCTTAGGAATAATTCTATCTCTAATAGTTTTAATTTTTAATGAGCCTTCTTTAGCTAT
TAATAATCCAAATCTTTTACCAGAAGAAAAGACTCCTGTTATCGATTTAGCCAAAACATTAAGTCCTAATCAGAAAATAT
CTTTAGAAGAAAATCTTAATAACTTAGAAATCGAAAGTGGTTGGAAGATTAAATATTTATCTCAATTTGAAAGTATCCCT
GGAATTGCAATAAAAGATTATTGGGATCTAGATGAAACAAGTTTATTAGTAATTGCAGATCCTAGAGGCGGGAATTTATT
GAATTTTAATGTTGGGGATGCATATTTTGCTTTTATGCCAAGATTATTTTGGGTAGAACTTCAAACAAGGTTTGGGAATC
AATATTATGTAAAAGATCATGGAGAAGATGGAGCTGTATTAGATGCAATTAATGCAGTAAAAATTTGTCTTAACAGAGGA
GGGTGCCAAGTTGTCCCTGGATTACCAAAAGAACAATATATTTGGACTTTGTGTACTTCTATCTTAGGAGGATTAGTGGC
AGGTTTTGCTGCTGCTCCAAGAAAAGAGGGGCAAATCATATCAATTGGATTTTTGGCTCTTCTTTCTCCTTTATGGGGAA
TGCTATTTGGCATTTTTGGTTTGGCACCAATAATTTCAAGGACAAGCGAAATAATCCCGTTATTCAAAAATGGTCTCGCT
TTTACTGCAGCAGCAATCGCAGGATACCTATTATCTCAAACTGTATTCTCTCGGTATGAGAAACCCAAAAAAGGTTAA

Upstream 100 bases:

>100_bases
ATAGTTCCTCCCTTTTTTATTATTTTTTTTATTAACCACTCTGGATTATTCGCGGGTAAGCTGTTCATCGGCGAAAATAC
ATAAAGACAAAAAACTTTTT

Downstream 100 bases:

>100_bases
AGATTTTCTTCCTAAATTCTCCATTTCAAAAAAGAATTTCTTCTTCAAGTATCTCTCCCAACTCTGAATACCATCGGTGA
GAAATATGAGTAAGTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLNNLEIESGWKIKYLSQFESIP
GIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRG
GCQVVPGLPKEQYIWTLCTSILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA
FTAAAIAGYLLSQTVFSRYEKPKKG

Sequences:

>Translated_265_residues
MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLNNLEIESGWKIKYLSQFESIP
GIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRG
GCQVVPGLPKEQYIWTLCTSILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA
FTAAAIAGYLLSQTVFSRYEKPKKG
>Mature_265_residues
MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLNNLEIESGWKIKYLSQFESIP
GIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRG
GCQVVPGLPKEQYIWTLCTSILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA
FTAAAIAGYLLSQTVFSRYEKPKKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29254; Mature: 29254

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLN
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEHHHCCC
NLEIESGWKIKYLSQFESIPGIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMP
CEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHH
RLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRGGCQVVPGLPKEQYIWTLCTS
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHH
ILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA
HHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FTAAAIAGYLLSQTVFSRYEKPKKG
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLN
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEHHHCCC
NLEIESGWKIKYLSQFESIPGIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMP
CEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHH
RLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRGGCQVVPGLPKEQYIWTLCTS
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHH
ILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA
HHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FTAAAIAGYLLSQTVFSRYEKPKKG
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA