| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123965962
Identifier: 123965962
GI number: 123965962
Start: 657723
End: 658979
Strand: Reverse
Name: 123965962
Synonym: P9515_07271
Alternate gene names: NA
Gene position: 658979-657723 (Counterclockwise)
Preceding gene: 123965963
Following gene: 123965961
Centisome position: 38.67
GC content: 31.98
Gene sequence:
>1257_bases ATGAATAATAATCATAATCTGAGTAATGGGAAAATAACTTGTTGTCAAATCTGTAGTAATAAGGAATTAATAAACGTCAT AAATTTAGGGCACCAAGCACCATGTGATTCTCTAATATGGCCAGAACAGCTAAATCAACCCGAAAAAAGATATCCTCTCA ACTTACAAAGATGTAAAGAGTGTGGTTTAGTTCAAATAGACCATGTTGTAGAGCCTCAAGAATTATTTTTTGCTGAATAT CCTTATAGAAGTGGAATCACTTCAACCCTTGCTAATAATCTAAGAAACACTGCATCAACTATTGTAAAAAGATATCAATT ACCAAAAGGAGGACTAGCTGTTGATCTTGGCTCAAATGATGGCACATTACTAGAAGGTTTTCAAAAAGAAAACATGAAAG TCCTTGGTTTTGAGCCTACTAATATAGCAAACCTAGCCAATGAGAAAGGAATAAAAACAATTCAAAAATTCTTTAATGAT TCATTAGTTCCTGAAATAATTAAAAAGTATGGCAAAGCCGAAGTGATTACCGCTTGTAATATGTTTGCTCATGTATCTCA ATTAGGAAGCCTAATTATGGGTGCGGAGAATCTATTAGTGGATAATGGTTTATTTGTTACTGAATCTCATTACTTATTAG ATTTAATTGACACTGTTCAGTATGATTCGATTTATCACGAACATCTTAAGTATTATTCTGTCAAATCAATTATAAAACTT TTTGAGTATTACAATTTTACTGTTATCGATATAGATAGAATTCCTAATTATGGAGGCTCCATAAGGGTTTATGCAAAAAA AGGAAAATCGCATGAGGTTTCAACTAAAGTGGAAAATCTTCTTAAAGAAGAAGTGGATAGAGGCTTATATAACAATTTAA TTTACGAGGATTTCAAAAACAAAATAAAAAAATCGAAACTTCAGCTACAAAATCTTATTTTAGATGGTAAAAATAATAAT CTAAAAATTGTGGGAATTGGCTGTCCTGGGAGAGCTACAACATTATTGAGTTACTGCAACTTAGATGCAGATGCTTTAGA TTATATTGCAGAACAAAGTACATCCTTAAAACTAGGATTATTCACCCCTGGAACATATATCCCGATAGTTGATGAGAGAA TAATGTTTGAAGATCAACCAGATATTGCGATTATACTTTCATGGCACTATTGGGAGCCAATTGTTGAAAAGCTTAGAGCA AAAGGTCTCAAATCCAAAATTATTATCCCACTTCCTGAAGTTAGGATAATCGATTGA
Upstream 100 bases:
>100_bases TATTAGATAAATAAATATTTACGAATTTCTAAGTTCTATTGTGTATAATTATAGATTAAATCTTTTTTACTCAAATATCT AAATTATTTTTTTGAACCCA
Downstream 100 bases:
>100_bases TTAAATAAAAAAAAAGATGCGCTTTGGAATTATTGGAGGAGGATTTGGATATGACTCTCATTTCGAAGCTTTAAAAAATA TAAAAGGTATAGATATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase TylCIII; NDP-Hexose 3-C-Methyltransferase Protein; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NDP-Hexose Methyltransferase Protein; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKECGLVQIDHVVEPQELFFAEY PYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSNDGTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFND SLVPEIIKKYGKAEVITACNMFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKNKIKKSKLQLQNLILDGKNNN LKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGLFTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRA KGLKSKIIIPLPEVRIID
Sequences:
>Translated_418_residues MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKECGLVQIDHVVEPQELFFAEY PYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSNDGTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFND SLVPEIIKKYGKAEVITACNMFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKNKIKKSKLQLQNLILDGKNNN LKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGLFTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRA KGLKSKIIIPLPEVRIID >Mature_418_residues MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKECGLVQIDHVVEPQELFFAEY PYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSNDGTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFND SLVPEIIKKYGKAEVITACNMFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKNKIKKSKLQLQNLILDGKNNN LKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGLFTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRA KGLKSKIIIPLPEVRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47353; Mature: 47353
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKE CCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHCCCCHHCCCCCHHHHHH CGLVQIDHVVEPQELFFAEYPYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSND CCCEEECCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC GTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFNDSLVPEIIKKYGKAEVITACN CHHHHCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH MFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL HHHHHHHHHHHHHCCCHHEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKN HHHHCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIKKSKLQLQNLILDGKNNNLKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGL HHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE FTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRAKGLKSKIIIPLPEVRIID ECCCCEEEEECCEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEECCCEEECC >Mature Secondary Structure MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKE CCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHCCCCHHCCCCCHHHHHH CGLVQIDHVVEPQELFFAEYPYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSND CCCEEECCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC GTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFNDSLVPEIIKKYGKAEVITACN CHHHHCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH MFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL HHHHHHHHHHHHHCCCHHEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKN HHHHCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIKKSKLQLQNLILDGKNNNLKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGL HHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE FTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRAKGLKSKIIIPLPEVRIID ECCCCEEEEECCEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA