| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is por [H]
Identifier: 123965935
GI number: 123965935
Start: 634095
End: 635096
Strand: Direct
Name: por [H]
Synonym: P9515_07001
Alternate gene names: 123965935
Gene position: 634095-635096 (Clockwise)
Preceding gene: 123965932
Following gene: 123965938
Centisome position: 37.21
GC content: 25.95
Gene sequence:
>1002_bases ATGTTGAAAGATAAAAATATCTTAATAACAGGTGGTAATTCTGGGATTGGTTTTTATGCAACTATTAACTTATTGAAGGC TAAAAATAATTTATATATTCCAATAAGATCTATACCAAGAAAAGATCAGTTTTTTTTTAAACTTCTCAAATATTTTGATA AAAAATACCTTGATAAGTATCTAAATCTTATTGAAAATATTGATTTAGCTAATTTAAGAAATATTGAAATACTAAGAGAT TATTTAAACAAAAAAAATGTATCTTTTGATGTGATTATCCTTAATGCAGGTTTGCAATATACGGGATCTTTTTATCCTAA AGTCTCAAAACAAGGCATTGAACTAACTTTCGCAGTCAATCATCTCGCACATTTTTACTTAGTTAATTCTCTTATCGGAC TAATAAATAATAAAAAAGAATCAAGAATTATTATTACATCATCTGATGTACATGATCCAAAGAGTTCTGGAGGCAATGTT GGTAAAAAAGCGGGCTTAAATAACCTAGTCAATTTTAAACAAGAAATTACAGGGAAATATTTAAATTTTAATTCAGATAA AGCTTACAAAAATAGTAAATTGTGTAATATATTATTTGCTAAAGAACTTTCAAAAAGATTACAAATTAAAGCTTATGAAG TAGCTGTTATTACTTGGGCCCCAGGACTTGTAATTCCAAATGAAGATTTAGGTTTCTTTAGATATAGTAAAAAGTTTAAT TTTTTTGGGTATATCATTTTTTCTATTATTGCAAAAAATATTTTAGGTATTTCTGAAAATGTAGAAAATGCAGGAAAATT GCTTTCTGAAATTGTTACTGATCCTGAATTCAATAATATTAAGTACCTGCATTTAAGCAATAAGCTTGTCTTTTTTAAAA AACATAAATTACTCAAAAGTGAGATTAGTGAAGAAGCTAATAAAAGTGATCTTGCTTTAAGACTTTGGAATCTAAGTGAA GAATTATGCCAATCATTTGGGTTCGTATCTCTCAATATTTAA
Upstream 100 bases:
>100_bases AGGACCTATGTTTTAAGTGTTTTAACAATAATTTATAAGATTTCAAAAGAAAAAATAATATATAATTTCTTATTATGAAT AATATTGTTTTTTAGATCTG
Downstream 100 bases:
>100_bases TGTTTGAGTTGGGAATGCAAATTCTATTTTGTTAGCGGAGAATTCTTCAATAATTCGTAAGTTAATACTTTGTTGAGCTT CCATAGCAGCTAAATAATTA
Product: putative light-dependent protochlorophyllide oxido-reductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLKDKNILITGGNSGIGFYATINLLKAKNNLYIPIRSIPRKDQFFFKLLKYFDKKYLDKYLNLIENIDLANLRNIEILRD YLNKKNVSFDVIILNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVNSLIGLINNKKESRIIITSSDVHDPKSSGGNV GKKAGLNNLVNFKQEITGKYLNFNSDKAYKNSKLCNILFAKELSKRLQIKAYEVAVITWAPGLVIPNEDLGFFRYSKKFN FFGYIIFSIIAKNILGISENVENAGKLLSEIVTDPEFNNIKYLHLSNKLVFFKKHKLLKSEISEEANKSDLALRLWNLSE ELCQSFGFVSLNI
Sequences:
>Translated_333_residues MLKDKNILITGGNSGIGFYATINLLKAKNNLYIPIRSIPRKDQFFFKLLKYFDKKYLDKYLNLIENIDLANLRNIEILRD YLNKKNVSFDVIILNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVNSLIGLINNKKESRIIITSSDVHDPKSSGGNV GKKAGLNNLVNFKQEITGKYLNFNSDKAYKNSKLCNILFAKELSKRLQIKAYEVAVITWAPGLVIPNEDLGFFRYSKKFN FFGYIIFSIIAKNILGISENVENAGKLLSEIVTDPEFNNIKYLHLSNKLVFFKKHKLLKSEISEEANKSDLALRLWNLSE ELCQSFGFVSLNI >Mature_333_residues MLKDKNILITGGNSGIGFYATINLLKAKNNLYIPIRSIPRKDQFFFKLLKYFDKKYLDKYLNLIENIDLANLRNIEILRD YLNKKNVSFDVIILNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVNSLIGLINNKKESRIIITSSDVHDPKSSGGNV GKKAGLNNLVNFKQEITGKYLNFNSDKAYKNSKLCNILFAKELSKRLQIKAYEVAVITWAPGLVIPNEDLGFFRYSKKFN FFGYIIFSIIAKNILGISENVENAGKLLSEIVTDPEFNNIKYLHLSNKLVFFKKHKLLKSEISEEANKSDLALRLWNLSE ELCQSFGFVSLNI
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706523, Length=321, Percent_Identity=25.5451713395639, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI10190746, Length=333, Percent_Identity=26.7267267267267, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI225579078, Length=328, Percent_Identity=25.609756097561, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI146231950, Length=234, Percent_Identity=25.6410256410256, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI166795268, Length=321, Percent_Identity=23.6760124610592, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532791, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI20129347, Length=327, Percent_Identity=27.217125382263, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI22024069, Length=286, Percent_Identity=26.9230769230769, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI45553409, Length=233, Percent_Identity=28.3261802575107, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647948, Length=233, Percent_Identity=28.3261802575107, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647946, Length=233, Percent_Identity=28.3261802575107, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24586328, Length=324, Percent_Identity=25.6172839506173, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI19921754, Length=218, Percent_Identity=27.5229357798165, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573296, Length=316, Percent_Identity=24.3670886075949, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161076371, Length=204, Percent_Identity=26.4705882352941, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24647931, Length=235, Percent_Identity=25.531914893617, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI45554248, Length=222, Percent_Identity=29.2792792792793, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24640117, Length=222, Percent_Identity=29.2792792792793, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 38021; Mature: 38021
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDKNILITGGNSGIGFYATINLLKAKNNLYIPIRSIPRKDQFFFKLLKYFDKKYLDKY CCCCCEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LNLIENIDLANLRNIEILRDYLNKKNVSFDVIILNAGLQYTGSFYPKVSKQGIELTFAVN HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHH HLAHFYLVNSLIGLINNKKESRIIITSSDVHDPKSSGGNVGKKAGLNNLVNFKQEITGKY HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCHH LNFNSDKAYKNSKLCNILFAKELSKRLQIKAYEVAVITWAPGLVIPNEDLGFFRYSKKFN CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCEEECCCCCCEEEECCCCC FFGYIIFSIIAKNILGISENVENAGKLLSEIVTDPEFNNIKYLHLSNKLVFFKKHKLLKS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEHHHHHHHH EISEEANKSDLALRLWNLSEELCQSFGFVSLNI HHHHHCCCCCEEEEEECCHHHHHHHCCCEEEEC >Mature Secondary Structure MLKDKNILITGGNSGIGFYATINLLKAKNNLYIPIRSIPRKDQFFFKLLKYFDKKYLDKY CCCCCEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LNLIENIDLANLRNIEILRDYLNKKNVSFDVIILNAGLQYTGSFYPKVSKQGIELTFAVN HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHH HLAHFYLVNSLIGLINNKKESRIIITSSDVHDPKSSGGNVGKKAGLNNLVNFKQEITGKY HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCHH LNFNSDKAYKNSKLCNILFAKELSKRLQIKAYEVAVITWAPGLVIPNEDLGFFRYSKKFN CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCEEECCCCCCEEEECCCCC FFGYIIFSIIAKNILGISENVENAGKLLSEIVTDPEFNNIKYLHLSNKLVFFKKHKLLKS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEHHHHHHHH EISEEANKSDLALRLWNLSEELCQSFGFVSLNI HHHHHCCCCCEEEEEECCHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9559561 [H]