| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965932
Identifier: 123965932
GI number: 123965932
Start: 631328
End: 631870
Strand: Direct
Name: 123965932
Synonym: P9515_06971
Alternate gene names: NA
Gene position: 631328-631870 (Clockwise)
Preceding gene: 123965930
Following gene: 123965935
Centisome position: 37.05
GC content: 28.91
Gene sequence:
>543_bases ATGGCGGGATATGTTTACCTCATAAGAGTTGGAGATCTTTATCGTATTGGTAAGGCAGATAATCTTGATAAGAAAATTAG AAAACTTAAACCTGATGAATTATTAACTTCCATAATGACTAAGGAACCTGAAACACTTGAAGCCAGGTTATTAAGAAAAT ATAAATCTCAAAGGATTCCTGAAACTGGATATTTAAAGCTCACTAAAAGACAGATATCTGAGTGTAAAAAACAATTTGAA TTAAAAGGAAATTTACCTCATACACTTGATGCTGAAGTCTCTATAACCTTATTCGCATCCTTTTTATTTTTTGGAATAAC TTTTTTAATTCTTAATTATTTTAATGTTGTATTTTTAAGAAATATTTCCTATTCATTCGCTTTAGCATCAGTACCTATGC TCATCTTGTCACTTACAGGCAGTTTTGGGGGATATTTTTCGGAAGATTTATCTCTGTTTTCATTAGTTACTAATAGAATA AAAGGTTTTTTTATGGCAATTGCTATGATTACAATGTCTTTTTTAATGTTCAGATTAAATTAA
Upstream 100 bases:
>100_bases AATGAATATAATATATCTGTTGTCATTTTGTAAAAAATTAAAATCTTTTTGATTCTTTTAGTATTATTTACATAGAAATA AAATTAATCTTACATCGCAA
Downstream 100 bases:
>100_bases ATTTCATGATTACAATTTAAAGCTATTTCAAAAGGAACTGACTGCATTGGTAATTTCAATATAGTAGAACAGATCTCAGC GATATCATTTGGTTGAGTCA
Product: NADH-ubiquinone/plastoquinone (complex I) protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAGYVYLIRVGDLYRIGKADNLDKKIRKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLTKRQISECKKQFE LKGNLPHTLDAEVSITLFASFLFFGITFLILNYFNVVFLRNISYSFALASVPMLILSLTGSFGGYFSEDLSLFSLVTNRI KGFFMAIAMITMSFLMFRLN
Sequences:
>Translated_180_residues MAGYVYLIRVGDLYRIGKADNLDKKIRKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLTKRQISECKKQFE LKGNLPHTLDAEVSITLFASFLFFGITFLILNYFNVVFLRNISYSFALASVPMLILSLTGSFGGYFSEDLSLFSLVTNRI KGFFMAIAMITMSFLMFRLN >Mature_179_residues AGYVYLIRVGDLYRIGKADNLDKKIRKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLTKRQISECKKQFEL KGNLPHTLDAEVSITLFASFLFFGITFLILNYFNVVFLRNISYSFALASVPMLILSLTGSFGGYFSEDLSLFSLVTNRIK GFFMAIAMITMSFLMFRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20703; Mature: 20572
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYVYLIRVGDLYRIGKADNLDKKIRKLKPDELLTSIMTKEPETLEARLLRKYKSQRIP CCCEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ETGYLKLTKRQISECKKQFELKGNLPHTLDAEVSITLFASFLFFGITFLILNYFNVVFLR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NISYSFALASVPMLILSLTGSFGGYFSEDLSLFSLVTNRIKGFFMAIAMITMSFLMFRLN HCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGYVYLIRVGDLYRIGKADNLDKKIRKLKPDELLTSIMTKEPETLEARLLRKYKSQRIP CCEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ETGYLKLTKRQISECKKQFELKGNLPHTLDAEVSITLFASFLFFGITFLILNYFNVVFLR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NISYSFALASVPMLILSLTGSFGGYFSEDLSLFSLVTNRIKGFFMAIAMITMSFLMFRLN HCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA