| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 123965938
GI number: 123965938
Start: 636866
End: 637318
Strand: Direct
Name: fur [H]
Synonym: P9515_07031
Alternate gene names: 123965938
Gene position: 636866-637318 (Clockwise)
Preceding gene: 123965935
Following gene: 123965941
Centisome position: 37.37
GC content: 33.77
Gene sequence:
>453_bases TTGTCGCTATCTTCTAAATACAAAGTAATTACTTCCCCTTTAGGAGATGGCCTACACAAAGATGGTAAAAGGTTAACCCC TCAAAGACTTAAAGTTTTAAATTTATTTGAGAATATTGGAGCAGGAAATCATTTAAGCGCTGAACAGGTGCATGAAAAAT TAGTTCAATCTAGTTCAAAAGTTTCTTTGGCAACAATATATAGAACTTTGAGACTTCTTGTTCAAATGGGCTTATTACAT GAATTAGAGCTTAGTGAAGGGGGGCATAGATACGAATTGCTTTCTAATGAAACTGCAGATCATCATCACTTGATTTGCAT AAGGTGTGGAAGAACTGAAGAATTTGAAAATGATGATGTGTTAAAGGCTGGTAAAGTAGCCGCAAAAGTTAATGGTTTTA AACTTATTGAATCTTCGTTAAATGTTAGAGCTATATGTCCTAATTGTGTTTAG
Upstream 100 bases:
>100_bases TAAAATAATCTTATTAGGTAAATTAGTAAATATTTATATGTTAAAAGTTGTTTTAATCTCATCAAGAGTTATTATTGAGA ATAATTAGTATTTATTTTTT
Downstream 100 bases:
>100_bases AGAAAACTAAGATAAAGTACCTCCACAGCTTGAACCAGCCCCTGCGGTGCAAGCAAAACAATGTTCTTTAACAGCTACTC TATAATTAAATTTAAATGAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSLSSKYKVITSPLGDGLHKDGKRLTPQRLKVLNLFENIGAGNHLSAEQVHEKLVQSSSKVSLATIYRTLRLLVQMGLLH ELELSEGGHRYELLSNETADHHHLICIRCGRTEEFENDDVLKAGKVAAKVNGFKLIESSLNVRAICPNCV
Sequences:
>Translated_150_residues MSLSSKYKVITSPLGDGLHKDGKRLTPQRLKVLNLFENIGAGNHLSAEQVHEKLVQSSSKVSLATIYRTLRLLVQMGLLH ELELSEGGHRYELLSNETADHHHLICIRCGRTEEFENDDVLKAGKVAAKVNGFKLIESSLNVRAICPNCV >Mature_149_residues SLSSKYKVITSPLGDGLHKDGKRLTPQRLKVLNLFENIGAGNHLSAEQVHEKLVQSSSKVSLATIYRTLRLLVQMGLLHE LELSEGGHRYELLSNETADHHHLICIRCGRTEEFENDDVLKAGKVAAKVNGFKLIESSLNVRAICPNCV
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates genes involved in iron scavenging or photosynthetic electron transport [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=29.7709923664122, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16642; Mature: 16511
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSKYKVITSPLGDGLHKDGKRLTPQRLKVLNLFENIGAGNHLSAEQVHEKLVQSSSK CCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC VSLATIYRTLRLLVQMGLLHELELSEGGHRYELLSNETADHHHLICIRCGRTEEFENDDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCC LKAGKVAAKVNGFKLIESSLNVRAICPNCV HHHCHHHHHCCCHHHHHCCCCEEEECCCCC >Mature Secondary Structure SLSSKYKVITSPLGDGLHKDGKRLTPQRLKVLNLFENIGAGNHLSAEQVHEKLVQSSSK CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC VSLATIYRTLRLLVQMGLLHELELSEGGHRYELLSNETADHHHLICIRCGRTEEFENDDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCC LKAGKVAAKVNGFKLIESSLNVRAICPNCV HHHCHHHHHCCCHHHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704986 [H]