Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965920

Identifier: 123965920

GI number: 123965920

Start: 622762

End: 623484

Strand: Reverse

Name: 123965920

Synonym: P9515_06851

Alternate gene names: NA

Gene position: 623484-622762 (Counterclockwise)

Preceding gene: 123965922

Following gene: 123965913

Centisome position: 36.59

GC content: 27.66

Gene sequence:

>723_bases
ATGATTTATTCAAAATATCAATTTAGTAACTATTGCTATTGGCCTTCAAATCCAAAAAAAATTATTGAATTTATTGGAGG
AAGTTATCTAGCATCAAAACCAGATTTAACTTATAAAAGATTTATAAAAAGCTTAATAAACAAAAATTATGCAGTTCACG
CATATAGGTATACCCCACAATTTGATCATCAAGAACTAGCTATTAAAGCATGGAAAGATTTTAAAAATTGTCAAAGATCA
TTATCAAAAAGAATAGGAATATCAATTCCATCTATTAGAATTGGGCATAGTCTTGGTTGTAAACTTCACCTAATTTCTCC
AGATGGGGGTAGGAATTGTGAAAAATTTATATCTATAAGTTTTAATAATTTTAGTGCAAACCGATCTATTCCATTTTTAA
AGCAATTTTCTCAGAAATTAGAATTCAAAAGTGAATTCAGTCCAAGCCCCAACAGAACATACGGGATAATTGAAAAAACT
TATACTCAAAAAAATAATTTTCTAATAAAATTTAATTCAGATAAATTAGATCAAACAGATAAATTACTTTCTTGTCTTAG
AGCAAGAAAAGAAGACAACTCAAAAGGGATAAAGCTTAAAGGAACGCATACTATTATCGCTAGCGCTGGGCTAAGGGAAA
ATTTATTAGGAGATTGGGCTGATGATGATTTAAAAAGATATACAATTAAACAGATTTCAAATTTGATTGAAAATTCAATT
TAA

Upstream 100 bases:

>100_bases
TATTTTTTTCTCTTAAATTAATAATAATTAAACAAAATTAATTAAGAATTTTAATCTTATTTAGAAAAACCTCATTAAAT
TCTGAATAAAATACATAACA

Downstream 100 bases:

>100_bases
GTACTCTTCTTTAATTTTTCCAAAACAGAACTATCCTCAAGGGTACTTATATCTCCATTGATTTTTTCCCCCGCCGCCAA
GGATCTTAAAATTCTCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIYSKYQFSNYCYWPSNPKKIIEFIGGSYLASKPDLTYKRFIKSLINKNYAVHAYRYTPQFDHQELAIKAWKDFKNCQRS
LSKRIGISIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANRSIPFLKQFSQKLEFKSEFSPSPNRTYGIIEKT
YTQKNNFLIKFNSDKLDQTDKLLSCLRARKEDNSKGIKLKGTHTIIASAGLRENLLGDWADDDLKRYTIKQISNLIENSI

Sequences:

>Translated_240_residues
MIYSKYQFSNYCYWPSNPKKIIEFIGGSYLASKPDLTYKRFIKSLINKNYAVHAYRYTPQFDHQELAIKAWKDFKNCQRS
LSKRIGISIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANRSIPFLKQFSQKLEFKSEFSPSPNRTYGIIEKT
YTQKNNFLIKFNSDKLDQTDKLLSCLRARKEDNSKGIKLKGTHTIIASAGLRENLLGDWADDDLKRYTIKQISNLIENSI
>Mature_240_residues
MIYSKYQFSNYCYWPSNPKKIIEFIGGSYLASKPDLTYKRFIKSLINKNYAVHAYRYTPQFDHQELAIKAWKDFKNCQRS
LSKRIGISIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANRSIPFLKQFSQKLEFKSEFSPSPNRTYGIIEKT
YTQKNNFLIKFNSDKLDQTDKLLSCLRARKEDNSKGIKLKGTHTIIASAGLRENLLGDWADDDLKRYTIKQISNLIENSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27760; Mature: 27760

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSKYQFSNYCYWPSNPKKIIEFIGGSYLASKPDLTYKRFIKSLINKNYAVHAYRYTPQ
CCCCCEECCCEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCC
FDHQELAIKAWKDFKNCQRSLSKRIGISIPSIRIGHSLGCKLHLISPDGGRNCEKFISIS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEE
FNNFSANRSIPFLKQFSQKLEFKSEFSPSPNRTYGIIEKTYTQKNNFLIKFNSDKLDQTD
ECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEECCCCEEEEECCCCCCHHH
KLLSCLRARKEDNSKGIKLKGTHTIIASAGLRENLLGDWADDDLKRYTIKQISNLIENSI
HHHHHHHHHCCCCCCCEEEECCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYSKYQFSNYCYWPSNPKKIIEFIGGSYLASKPDLTYKRFIKSLINKNYAVHAYRYTPQ
CCCCCEECCCEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCC
FDHQELAIKAWKDFKNCQRSLSKRIGISIPSIRIGHSLGCKLHLISPDGGRNCEKFISIS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEE
FNNFSANRSIPFLKQFSQKLEFKSEFSPSPNRTYGIIEKTYTQKNNFLIKFNSDKLDQTD
ECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEECCCCEEEEECCCCCCHHH
KLLSCLRARKEDNSKGIKLKGTHTIIASAGLRENLLGDWADDDLKRYTIKQISNLIENSI
HHHHHHHHHCCCCCCCEEEECCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA