| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is aroA
Identifier: 123965913
GI number: 123965913
Start: 614775
End: 616091
Strand: Reverse
Name: aroA
Synonym: P9515_06781
Alternate gene names: 123965913
Gene position: 616091-614775 (Counterclockwise)
Preceding gene: 123965920
Following gene: 123965912
Centisome position: 36.15
GC content: 35.84
Gene sequence:
>1317_bases TTGAATACAAACGATATACGCACCGTTAAAGGTGAAAAGAGTTTACAAGGAACAATAAAAGTCCCTGGAGATAAATCAAT CTCGCACAGATCTTTAATAATTGGAAGTATTGCAGAAGGTGAAACTAATATTGAAGGTTTTTTATATTCTGAAGACCCAC TTTCAACTGCTGATTGTCTAAGAAAATTAGGTGTACATATTCCTGAAATTAAAAAGGATCAGCCTTTTACCATTAGAGGT TTAGGTATTGATGGATTTAGAGAACCTAAAGAAATTCTTAATTGTGGTAATTCAGGTACCACAATGAGATTATTAATGGG ACTTTTGGCTGGTCAAACAGATAGGAATTTCATATTAACTGGAGACAAATCTCTTAATGAAAGACCAATGGGAAGAGTTA GTAAGCCACTATCATTAATGGGAGGGAAAATTTATGGAAGAGAAAATGGTACAAAAGCTCCAATTTCCATAACGGGGAAC AAACTAAAGGGTTGCGTCATTGGAACTCCGGTTGCAAGTGCTCAAGTTAAGTCTGCAATCTTACTAGCAGGGTTAAATGC CTCTGGAACTACTTCGGTTATTGAACCTGCCTCTTCCAGAGATCATACTGAAAGAATGCTTAAAGCATTCGGGGCTGACA TAAAAATAAGAGGGGAATTAGGAAGAAATATAGTAATAAAATCAGGTAATAATTTAACCGGTCAAAATATATTGATCCCA GGAGACATCAGCTCAGCAGCTTTTTGGATGATTGCAGCATCAATAGTGCCTGAATCTGAAATCTTGGTTAAAAATGTAGG CCTAAATCCAACAAGAACGGGGATATTACATGTTATGGATGAAATGGGATGCGATTATAAAATAATTGAAAAATCAACTA TTGCAGGCGAACCCATAGGTTCTATAAAGGTAAAATATGTAAGTAATTTGAAACCTTTTAAAGTACAAGGTGATATCCTT CCAAAACTCATAGACGAAATTCCAATACTTACGGTTGCAGCTTGTTTTTGCAATGGGGTTTCAGAAATTAAAGATGCAAA AGAATTAAGAGTTAAAGAAACCGACCGATTAAAAGTTATGGCCAGACAACTTAAAAAATTTGGTGCAAATATTACTGAGA AAGAAGACGGTTTAATAATAACTGGCGAGTCTAAATTCCATTCTGCTGAAGTTGACAGTGAAACTGACCATCGAGTCTCG ATGAGCCTTGCAATAGCATCACTTTTAGCTAAGGGCTCGACAAGGATTGCAAGAGCAGGGGCTTCTAATGTATCGTATCC AACTTTTTGGGATGATCTTGAAAAACTAATTAATTAA
Upstream 100 bases:
>100_bases TAGAAAACAGTTACTTAACTTTGAATATTTTTTTTTAAAAACAAACTTATTGATATTATATATCTAATTAAAAACTTATA AAATCCAACTAATTATTAAT
Downstream 100 bases:
>100_bases TCTAATAGAATTGTTTACAGAATTTCAGGAGATTTCAACTCGGGACGGAAGTATTTCTCTTAGGAGTCTTTTTTTTCAAG AGAATTTTCATAGCCTTGAA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MNTNDIRTVKGEKSLQGTIKVPGDKSISHRSLIIGSIAEGETNIEGFLYSEDPLSTADCLRKLGVHIPEIKKDQPFTIRG LGIDGFREPKEILNCGNSGTTMRLLMGLLAGQTDRNFILTGDKSLNERPMGRVSKPLSLMGGKIYGRENGTKAPISITGN KLKGCVIGTPVASAQVKSAILLAGLNASGTTSVIEPASSRDHTERMLKAFGADIKIRGELGRNIVIKSGNNLTGQNILIP GDISSAAFWMIAASIVPESEILVKNVGLNPTRTGILHVMDEMGCDYKIIEKSTIAGEPIGSIKVKYVSNLKPFKVQGDIL PKLIDEIPILTVAACFCNGVSEIKDAKELRVKETDRLKVMARQLKKFGANITEKEDGLIITGESKFHSAEVDSETDHRVS MSLAIASLLAKGSTRIARAGASNVSYPTFWDDLEKLIN
Sequences:
>Translated_438_residues MNTNDIRTVKGEKSLQGTIKVPGDKSISHRSLIIGSIAEGETNIEGFLYSEDPLSTADCLRKLGVHIPEIKKDQPFTIRG LGIDGFREPKEILNCGNSGTTMRLLMGLLAGQTDRNFILTGDKSLNERPMGRVSKPLSLMGGKIYGRENGTKAPISITGN KLKGCVIGTPVASAQVKSAILLAGLNASGTTSVIEPASSRDHTERMLKAFGADIKIRGELGRNIVIKSGNNLTGQNILIP GDISSAAFWMIAASIVPESEILVKNVGLNPTRTGILHVMDEMGCDYKIIEKSTIAGEPIGSIKVKYVSNLKPFKVQGDIL PKLIDEIPILTVAACFCNGVSEIKDAKELRVKETDRLKVMARQLKKFGANITEKEDGLIITGESKFHSAEVDSETDHRVS MSLAIASLLAKGSTRIARAGASNVSYPTFWDDLEKLIN >Mature_438_residues MNTNDIRTVKGEKSLQGTIKVPGDKSISHRSLIIGSIAEGETNIEGFLYSEDPLSTADCLRKLGVHIPEIKKDQPFTIRG LGIDGFREPKEILNCGNSGTTMRLLMGLLAGQTDRNFILTGDKSLNERPMGRVSKPLSLMGGKIYGRENGTKAPISITGN KLKGCVIGTPVASAQVKSAILLAGLNASGTTSVIEPASSRDHTERMLKAFGADIKIRGELGRNIVIKSGNNLTGQNILIP GDISSAAFWMIAASIVPESEILVKNVGLNPTRTGILHVMDEMGCDYKIIEKSTIAGEPIGSIKVKYVSNLKPFKVQGDIL PKLIDEIPILTVAACFCNGVSEIKDAKELRVKETDRLKVMARQLKKFGANITEKEDGLIITGESKFHSAEVDSETDHRVS MSLAIASLLAKGSTRIARAGASNVSYPTFWDDLEKLIN
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=437, Percent_Identity=28.3752860411899, Blast_Score=125, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6320332, Length=466, Percent_Identity=25.5364806866953, Blast_Score=116, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_PROM5 (A2BVS6)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010994.1 - ProteinModelPortal: A2BVS6 - SMR: A2BVS6 - STRING: A2BVS6 - GeneID: 4719556 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_06781 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: LSRNHTE - ProtClustDB: PRK02427 - BioCyc: PMAR167542:P9515ORF_0714-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 47184; Mature: 47184
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNDIRTVKGEKSLQGTIKVPGDKSISHRSLIIGSIAEGETNIEGFLYSEDPLSTADCL CCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHH RKLGVHIPEIKKDQPFTIRGLGIDGFREPKEILNCGNSGTTMRLLMGLLAGQTDRNFILT HHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEE GDKSLNERPMGRVSKPLSLMGGKIYGRENGTKAPISITGNKLKGCVIGTPVASAQVKSAI CCCCCCCCCCCHHCCCHHHHCCEEEECCCCCCCCEEEECCCCCEEEEECCCCHHHHHCEE LLAGLNASGTTSVIEPASSRDHTERMLKAFGADIKIRGELGRNIVIKSGNNLTGQNILIP EEEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCEEEEC GDISSAAFWMIAASIVPESEILVKNVGLNPTRTGILHVMDEMGCDYKIIEKSTIAGEPIG CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC SIKVKYVSNLKPFKVQGDILPKLIDEIPILTVAACFCNGVSEIKDAKELRVKETDRLKVM CEEEEEECCCCCEEECCCHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH ARQLKKFGANITEKEDGLIITGESKFHSAEVDSETDHRVSMSLAIASLLAKGSTRIARAG HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC ASNVSYPTFWDDLEKLIN CCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNTNDIRTVKGEKSLQGTIKVPGDKSISHRSLIIGSIAEGETNIEGFLYSEDPLSTADCL CCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHH RKLGVHIPEIKKDQPFTIRGLGIDGFREPKEILNCGNSGTTMRLLMGLLAGQTDRNFILT HHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEE GDKSLNERPMGRVSKPLSLMGGKIYGRENGTKAPISITGNKLKGCVIGTPVASAQVKSAI CCCCCCCCCCCHHCCCHHHHCCEEEECCCCCCCCEEEECCCCCEEEEECCCCHHHHHCEE LLAGLNASGTTSVIEPASSRDHTERMLKAFGADIKIRGELGRNIVIKSGNNLTGQNILIP EEEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCEEEEC GDISSAAFWMIAASIVPESEILVKNVGLNPTRTGILHVMDEMGCDYKIIEKSTIAGEPIG CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC SIKVKYVSNLKPFKVQGDILPKLIDEIPILTVAACFCNGVSEIKDAKELRVKETDRLKVM CEEEEEECCCCCEEECCCHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH ARQLKKFGANITEKEDGLIITGESKFHSAEVDSETDHRVSMSLAIASLLAKGSTRIARAG HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC ASNVSYPTFWDDLEKLIN CCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA