| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965922
Identifier: 123965922
GI number: 123965922
Start: 624465
End: 624866
Strand: Reverse
Name: 123965922
Synonym: P9515_06871
Alternate gene names: NA
Gene position: 624866-624465 (Counterclockwise)
Preceding gene: 123965927
Following gene: 123965920
Centisome position: 36.67
GC content: 39.8
Gene sequence:
>402_bases TTGGGAATAACTAATAATAAAGAGAGTCAGCATTGTGGCACAAAGCCAAAAAAAGTTGCATTCGGCATTGCCCCTTTGGG TATTGTTTCCATTGGAATAGTACCAATGGGTGTTATTAGTATTGGGGTCGTTCCAATGGGTGTTTTTTCTTTTGGTGCTG TTGCTATGGGAATAGTCAACTTATCAGTAGTGGGTATGGGAATCATTTCTGCTGGAATTACCACAATGGGTTTATGGGAA TATTCTCCCAAATCACAAATCCATGATCATCAGAGTCGATCCGAGAAAATCATGCCAGGACTTTTTAAAACAAAAGAAGA AGCTGAAAGAGAGGCTGCAAAATATGGCTGCATAGGTGCACACAAAATGGGAGAGAAATGGATGCCATGTAAAAACCACT AA
Upstream 100 bases:
>100_bases AAAGTTCTAAATTAATAATTCAAATTTTTTAATTTACATAGAAATTCAATTTTGCTGAGATTCTGTATGTCATAATTTAA TCTAACATTCTTACAAAATA
Downstream 100 bases:
>100_bases TAATATTTAAGTTTAGAAAAAATAAAATATTAGTTTATTATCTGCACTTTAAAATCAAGGCTATTAGCCTCTTCAACAGT TAATTTTCTAGCCCAAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGITNNKESQHCGTKPKKVAFGIAPLGIVSIGIVPMGVISIGVVPMGVFSFGAVAMGIVNLSVVGMGIISAGITTMGLWE YSPKSQIHDHQSRSEKIMPGLFKTKEEAEREAAKYGCIGAHKMGEKWMPCKNH
Sequences:
>Translated_133_residues MGITNNKESQHCGTKPKKVAFGIAPLGIVSIGIVPMGVISIGVVPMGVFSFGAVAMGIVNLSVVGMGIISAGITTMGLWE YSPKSQIHDHQSRSEKIMPGLFKTKEEAEREAAKYGCIGAHKMGEKWMPCKNH >Mature_132_residues GITNNKESQHCGTKPKKVAFGIAPLGIVSIGIVPMGVISIGVVPMGVFSFGAVAMGIVNLSVVGMGIISAGITTMGLWEY SPKSQIHDHQSRSEKIMPGLFKTKEEAEREAAKYGCIGAHKMGEKWMPCKNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14171; Mature: 14040
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITNNKESQHCGTKPKKVAFGIAPLGIVSIGIVPMGVISIGVVPMGVFSFGAVAMGIVN CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVVGMGIISAGITTMGLWEYSPKSQIHDHQSRSEKIMPGLFKTKEEAEREAAKYGCIGA HHHHHHHHHHHCHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC HKMGEKWMPCKNH HHCCCCCCCCCCC >Mature Secondary Structure GITNNKESQHCGTKPKKVAFGIAPLGIVSIGIVPMGVISIGVVPMGVFSFGAVAMGIVN CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVVGMGIISAGITTMGLWEYSPKSQIHDHQSRSEKIMPGLFKTKEEAEREAAKYGCIGA HHHHHHHHHHHCHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC HKMGEKWMPCKNH HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA