| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is comB [H]
Identifier: 123965914
GI number: 123965914
Start: 616371
End: 616946
Strand: Direct
Name: comB [H]
Synonym: P9515_06791
Alternate gene names: 123965914
Gene position: 616371-616946 (Clockwise)
Preceding gene: 123965910
Following gene: 123965915
Centisome position: 36.17
GC content: 35.07
Gene sequence:
>576_bases TTGAAGGAAACTGCTGAAAGATGGGATGCCAATAAAAAATTAATGCTTGGCGAAAGAGGTGGAAAAAAAATTAATGGTTT TGATTTAGGGAATTCTCCATTATCTGTAACGAAAGAGAAAGTTCAGGGTAAAAGACTATTTATGAGTACAACGAATGGGA CTAAATCATTAAAAAAGGTTCAAAATGTAAAATATTTATTTGCAATGGCTCTTCCAAATAGAAAAGCAGTTGCTGAAAGG ATAATGTCTTTAAATAAAAAAAACGTACTTATACTTGGGAGCGGATGGGAGGGCTCTTATTCCTTGGAAGATTCCTTGGC TGCAGGAGCACTCGCTTCTTACATAAAATATAATTTTAATAATGAAGTTAATATTTCTAATGATGAATTGCAGGCTTCAT TAGCTCTTTGGAATACATGGAAGAACGATATCCTAGGATGCTTGAAGACAGCGACTCACGGAAAAAGATTGACAAGTCTC GGTGACTACGATGATGATCTTAAGTGTTGTTCTGAACTTGATTGTTTAGATATTGTTCCTACTCAATTTGAGAGAGGTGT AATTCGTGCCTCATGA
Upstream 100 bases:
>100_bases TATTGCTGTTGTTATTGATGTTTTAAGAGCGTCAACAACTATTTCTTGGGCATTAAAAAACGGTGCAGATTCAATTCAGT TTTTTTCTGATTTAGATCTA
Downstream 100 bases:
>100_bases TTTGCAAATTTATTATCTTGGAGTTAAATCTTGACTGATTTTTTAGTTGCCGCTTTACAAATAACGAGTACTTCAAATGT TGAAACAAATTTTGCTGAAG
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKETAERWDANKKLMLGERGGKKINGFDLGNSPLSVTKEKVQGKRLFMSTTNGTKSLKKVQNVKYLFAMALPNRKAVAER IMSLNKKNVLILGSGWEGSYSLEDSLAAGALASYIKYNFNNEVNISNDELQASLALWNTWKNDILGCLKTATHGKRLTSL GDYDDDLKCCSELDCLDIVPTQFERGVIRAS
Sequences:
>Translated_191_residues MKETAERWDANKKLMLGERGGKKINGFDLGNSPLSVTKEKVQGKRLFMSTTNGTKSLKKVQNVKYLFAMALPNRKAVAER IMSLNKKNVLILGSGWEGSYSLEDSLAAGALASYIKYNFNNEVNISNDELQASLALWNTWKNDILGCLKTATHGKRLTSL GDYDDDLKCCSELDCLDIVPTQFERGVIRAS >Mature_191_residues MKETAERWDANKKLMLGERGGKKINGFDLGNSPLSVTKEKVQGKRLFMSTTNGTKSLKKVQNVKYLFAMALPNRKAVAER IMSLNKKNVLILGSGWEGSYSLEDSLAAGALASYIKYNFNNEVNISNDELQASLALWNTWKNDILGCLKTATHGKRLTSL GDYDDDLKCCSELDCLDIVPTQFERGVIRAS
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 21217; Mature: 21217
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETAERWDANKKLMLGERGGKKINGFDLGNSPLSVTKEKVQGKRLFMSTTNGTKSLKKV CCCCHHHHCCCCEEEEECCCCCEECCEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHH QNVKYLFAMALPNRKAVAERIMSLNKKNVLILGSGWEGSYSLEDSLAAGALASYIKYNFN HHHHHHEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC NEVNISNDELQASLALWNTWKNDILGCLKTATHGKRLTSLGDYDDDLKCCSELDCLDIVP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHCCCCCCCCC TQFERGVIRAS CHHHCCCCCCC >Mature Secondary Structure MKETAERWDANKKLMLGERGGKKINGFDLGNSPLSVTKEKVQGKRLFMSTTNGTKSLKKV CCCCHHHHCCCCEEEEECCCCCEECCEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHH QNVKYLFAMALPNRKAVAERIMSLNKKNVLILGSGWEGSYSLEDSLAAGALASYIKYNFN HHHHHHEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC NEVNISNDELQASLALWNTWKNDILGCLKTATHGKRLTSLGDYDDDLKCCSELDCLDIVP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHCCCCCCCCC TQFERGVIRAS CHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917486 [H]