| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965912
Identifier: 123965912
GI number: 123965912
Start: 613871
End: 614764
Strand: Reverse
Name: 123965912
Synonym: P9515_06771
Alternate gene names: NA
Gene position: 614764-613871 (Counterclockwise)
Preceding gene: 123965913
Following gene: 123965911
Centisome position: 36.07
GC content: 27.63
Gene sequence:
>894_bases TTGTTTACAGAATTTCAGGAGATTTCAACTCGGGACGGAAGTATTTCTCTTAGGAGTCTTTTTTTTCAAGAGAATTTTCA TAGCCTTGAAGGAGCACTTAAAGAAACTGAAATTAAATTCATAAATCCTTCCAATTTAAAAAGATTTAAGGATAAGTCTG TAAATGTATTAGATATTTGCTTCGGTTTAGGATATAACTCTGCTTCGTTGTTTAGTAACTTAATTAAACAAAATTCTTTT TTAAAATGGTATGCCTTGGAGATTGATAATAAACCTCTAGAATATTCTTTAAGAAATAAATCATTTAAAAAACTATGGGA TCAGAAAGTTTTAAAAATATTTAAATCTTTAGCTCAGAATTGTAAATATAAGGATCAATTTTTTGAATGTGATATTTTAT GGGGCGATGCCAGAAAAACAATTTATAGTATTCCTGCAAATATAAAGTTCGACTTGATTTATTTAGATGGATTTTCTCCT CAAAAATGTCCTCAAATTTGGTCAGTTGAATTTTTAGAAAAAGTAACTCAAAGACTCAATACTAATGGATATTTAATAAC CTACTCTTCTTCAGCTGCGATAAGAAAAACATTAAGAAATTTTGGTTTGAATATTTTCAATATAAAACCAAATTTTGTAT CTAAAAATTTATGGAGTAATGGGACTATTGCAATAAATATAATTGACGAAAAAATTTCCAAAAGCAATCTATCTTTTACG AAATTATCTTCGATGGAAGAAGAACATTTATTGACTAAAGCAAGTATTCCATATCGCGATCCTACTTTAAATTCAAATGC TAATGATATTATTCAAAAAAGAGTGAAAGAGCAATTATGCTCTAATCTTATAACTCCAAAAGAATGGAGAGATAAATGGG GAATGACGAAATAG
Upstream 100 bases:
>100_bases GCTAAGGGCTCGACAAGGATTGCAAGAGCAGGGGCTTCTAATGTATCGTATCCAACTTTTTGGGATGATCTTGAAAAACT AATTAATTAATCTAATAGAA
Downstream 100 bases:
>100_bases ATCTTAAACAGTAAGATTTAAATAAAATATCTTAATAAATATGTTAACTGTCGCGATATTAGCTGCAGGTAAGGGTACTA GGATGGCAAGCTCACTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MFTEFQEISTRDGSISLRSLFFQENFHSLEGALKETEIKFINPSNLKRFKDKSVNVLDICFGLGYNSASLFSNLIKQNSF LKWYALEIDNKPLEYSLRNKSFKKLWDQKVLKIFKSLAQNCKYKDQFFECDILWGDARKTIYSIPANIKFDLIYLDGFSP QKCPQIWSVEFLEKVTQRLNTNGYLITYSSSAAIRKTLRNFGLNIFNIKPNFVSKNLWSNGTIAINIIDEKISKSNLSFT KLSSMEEEHLLTKASIPYRDPTLNSNANDIIQKRVKEQLCSNLITPKEWRDKWGMTK
Sequences:
>Translated_297_residues MFTEFQEISTRDGSISLRSLFFQENFHSLEGALKETEIKFINPSNLKRFKDKSVNVLDICFGLGYNSASLFSNLIKQNSF LKWYALEIDNKPLEYSLRNKSFKKLWDQKVLKIFKSLAQNCKYKDQFFECDILWGDARKTIYSIPANIKFDLIYLDGFSP QKCPQIWSVEFLEKVTQRLNTNGYLITYSSSAAIRKTLRNFGLNIFNIKPNFVSKNLWSNGTIAINIIDEKISKSNLSFT KLSSMEEEHLLTKASIPYRDPTLNSNANDIIQKRVKEQLCSNLITPKEWRDKWGMTK >Mature_297_residues MFTEFQEISTRDGSISLRSLFFQENFHSLEGALKETEIKFINPSNLKRFKDKSVNVLDICFGLGYNSASLFSNLIKQNSF LKWYALEIDNKPLEYSLRNKSFKKLWDQKVLKIFKSLAQNCKYKDQFFECDILWGDARKTIYSIPANIKFDLIYLDGFSP QKCPQIWSVEFLEKVTQRLNTNGYLITYSSSAAIRKTLRNFGLNIFNIKPNFVSKNLWSNGTIAINIIDEKISKSNLSFT KLSSMEEEHLLTKASIPYRDPTLNSNANDIIQKRVKEQLCSNLITPKEWRDKWGMTK
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 34577; Mature: 34577
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTEFQEISTRDGSISLRSLFFQENFHSLEGALKETEIKFINPSNLKRFKDKSVNVLDIC CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHCCCCCEEEHH FGLGYNSASLFSNLIKQNSFLKWYALEIDNKPLEYSLRNKSFKKLWDQKVLKIFKSLAQN HHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHC CKYKDQFFECDILWGDARKTIYSIPANIKFDLIYLDGFSPQKCPQIWSVEFLEKVTQRLN CCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHHHHHC TNGYLITYSSSAAIRKTLRNFGLNIFNIKPNFVSKNLWSNGTIAINIIDEKISKSNLSFT CCCEEEEECCCHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCEEEEEECCHHCCCCCCHH KLSSMEEEHLLTKASIPYRDPTLNSNANDIIQKRVKEQLCSNLITPKEWRDKWGMTK HHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC >Mature Secondary Structure MFTEFQEISTRDGSISLRSLFFQENFHSLEGALKETEIKFINPSNLKRFKDKSVNVLDIC CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHCCCCCEEEHH FGLGYNSASLFSNLIKQNSFLKWYALEIDNKPLEYSLRNKSFKKLWDQKVLKIFKSLAQN HHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHC CKYKDQFFECDILWGDARKTIYSIPANIKFDLIYLDGFSPQKCPQIWSVEFLEKVTQRLN CCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHHHHHC TNGYLITYSSSAAIRKTLRNFGLNIFNIKPNFVSKNLWSNGTIAINIIDEKISKSNLSFT CCCEEEEECCCHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCEEEEEECCHHCCCCCCHH KLSSMEEEHLLTKASIPYRDPTLNSNANDIIQKRVKEQLCSNLITPKEWRDKWGMTK HHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]