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The map label for this gene is fixC [C]

Identifier: 123965819

GI number: 123965819

Start: 522207

End: 523340

Strand: Reverse

Name: fixC [C]

Synonym: P9515_05841

Alternate gene names: 123965819

Gene position: 523340-522207 (Counterclockwise)

Preceding gene: 123965820

Following gene: 123965814

Centisome position: 30.71

GC content: 33.51

Gene sequence:

>1134_bases
TTGAAGGAATTTGACGCCATAATAATTGGAGGTGGTTTATCTGGATCTTCAACAGCTCTAAACCTATCAAAAAAAGGTTA
TTCAGTTTTAATTATAGAAAAGGAAGCAACAGGAATTATTAAGCCCTGCGCAGGAGGGATGGCATCTTCAATGAAACAAT
ATCTCCCATTAGATATTGATCAAGCAATAGAATCCAAAATAAGGAATGTTGAATTCAGATGGGAATCATCTGATAATGTT
AACGCTGACCTTTCTGGCGAATCACCTTTTTGGATAATTAGAAGAGAAAAATTAGATCAATTATTACTTGATGAAGCTCT
AAAGAATGGCATTGAAATACTGAGACCAGCGCAGGTTGAAGAAATAATATCTCAAAATAAGACTTGGAGAATAAAATGCA
GTCATAAAGATATTTATAAATCTAAATATCTTGTTATCGCTGACGGTTCACAATCACAATGGGCAGGCTATTTTAATCTG
GGTCCAAGAAAACCAAAATTTGCCAACACTATTGCCTTAAGGTTAAAAGGTTTAGGAAATATTCCCAAAGATTCAGTTAG
ATTTGAGTTTGGTTTTATAAAATATGGGTTTGCGTGGGCATTCCCATTAAAAGATAGTGTCAATATTGGATTAGGCACTT
TTATAAACAATAAGCTTTTAGAAGACGAAGCCCTGAATAATAAAGTATTAAAAAGTTTCGGATTTGAAGATTTATCTTTT
GAAAAAGTTCATAAAAAACTAAGGATTTGGAATGGCACTCACAAACTCAATGGAGATAGAGTAGTTGCAGTGGGGGATGC
TGCATCCCTTTGCGATCCATTTTTAGCAGAAGGGATAAGGCCTTCTTTAATTAGTAGTTATTTCGCTGCAGAAAGTATCC
ACCAATGTTTATCTAGTAATAAAAGTGATTTAAATACTTATTCAATAAAAATTAATAATGAATGGGGGAAATCTATGGCA
TGGGGCAAGAGAATTGCTCAAATCTTTTATAGGTTCCCAAAAACTGGGTATCAATTAGGAGTCAAACGAAAAACAGCTCC
AAAAAGAATCGCTCAAATATTATCTGGTCAAATGAGTTATGAAGATATAGCTAAGAGAGTTATAAAGAGGCTATTAACAA
ATAGTCAAGGTTAA

Upstream 100 bases:

>100_bases
AATCAAGGGATAACCAATTAGAAATACAAAAATTTACTGACAAATATATTTCTTTAATAGAAACTAAACTATCTGAAAAA
GAGAAAGAGATACTTAAAGT

Downstream 100 bases:

>100_bases
CTTGCCATTAAAAGTTGATAAAACTTAAGTTGCTGAAATTAATTTTTGATTATTAATTTCTGAAAATCTTTTAAGTAACA
ATTCTTCTAATTCTTCTATT

Product: NAD binding site

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKEFDAIIIGGGLSGSSTALNLSKKGYSVLIIEKEATGIIKPCAGGMASSMKQYLPLDIDQAIESKIRNVEFRWESSDNV
NADLSGESPFWIIRREKLDQLLLDEALKNGIEILRPAQVEEIISQNKTWRIKCSHKDIYKSKYLVIADGSQSQWAGYFNL
GPRKPKFANTIALRLKGLGNIPKDSVRFEFGFIKYGFAWAFPLKDSVNIGLGTFINNKLLEDEALNNKVLKSFGFEDLSF
EKVHKKLRIWNGTHKLNGDRVVAVGDAASLCDPFLAEGIRPSLISSYFAAESIHQCLSSNKSDLNTYSIKINNEWGKSMA
WGKRIAQIFYRFPKTGYQLGVKRKTAPKRIAQILSGQMSYEDIAKRVIKRLLTNSQG

Sequences:

>Translated_377_residues
MKEFDAIIIGGGLSGSSTALNLSKKGYSVLIIEKEATGIIKPCAGGMASSMKQYLPLDIDQAIESKIRNVEFRWESSDNV
NADLSGESPFWIIRREKLDQLLLDEALKNGIEILRPAQVEEIISQNKTWRIKCSHKDIYKSKYLVIADGSQSQWAGYFNL
GPRKPKFANTIALRLKGLGNIPKDSVRFEFGFIKYGFAWAFPLKDSVNIGLGTFINNKLLEDEALNNKVLKSFGFEDLSF
EKVHKKLRIWNGTHKLNGDRVVAVGDAASLCDPFLAEGIRPSLISSYFAAESIHQCLSSNKSDLNTYSIKINNEWGKSMA
WGKRIAQIFYRFPKTGYQLGVKRKTAPKRIAQILSGQMSYEDIAKRVIKRLLTNSQG
>Mature_377_residues
MKEFDAIIIGGGLSGSSTALNLSKKGYSVLIIEKEATGIIKPCAGGMASSMKQYLPLDIDQAIESKIRNVEFRWESSDNV
NADLSGESPFWIIRREKLDQLLLDEALKNGIEILRPAQVEEIISQNKTWRIKCSHKDIYKSKYLVIADGSQSQWAGYFNL
GPRKPKFANTIALRLKGLGNIPKDSVRFEFGFIKYGFAWAFPLKDSVNIGLGTFINNKLLEDEALNNKVLKSFGFEDLSF
EKVHKKLRIWNGTHKLNGDRVVAVGDAASLCDPFLAEGIRPSLISSYFAAESIHQCLSSNKSDLNTYSIKINNEWGKSMA
WGKRIAQIFYRFPKTGYQLGVKRKTAPKRIAQILSGQMSYEDIAKRVIKRLLTNSQG

Specific function: Probably Accepts Electrons From Fixa/Fixb And Reduces A Quinone. [C]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786227, Length=307, Percent_Identity=26.0586319218241, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787991, Length=172, Percent_Identity=26.1627906976744, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 42271; Mature: 42271

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFDAIIIGGGLSGSSTALNLSKKGYSVLIIEKEATGIIKPCAGGMASSMKQYLPLDID
CCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHH
QAIESKIRNVEFRWESSDNVNADLSGESPFWIIRREKLDQLLLDEALKNGIEILRPAQVE
HHHHHHHCCEEEEECCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHCCCHHHH
EIISQNKTWRIKCSHKDIYKSKYLVIADGSQSQWAGYFNLGPRKPKFANTIALRLKGLGN
HHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCHHHHHEEEECCCCC
IPKDSVRFEFGFIKYGFAWAFPLKDSVNIGLGTFINNKLLEDEALNNKVLKSFGFEDLSF
CCCCCEEEEEEEEEECEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCH
EKVHKKLRIWNGTHKLNGDRVVAVGDAASLCDPFLAEGIRPSLISSYFAAESIHQCLSSN
HHHHHHHHHCCCCEEECCCEEEEECCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
KSDLNTYSIKINNEWGKSMAWGKRIAQIFYRFPKTGYQLGVKRKTAPKRIAQILSGQMSY
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCH
EDIAKRVIKRLLTNSQG
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEFDAIIIGGGLSGSSTALNLSKKGYSVLIIEKEATGIIKPCAGGMASSMKQYLPLDID
CCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHH
QAIESKIRNVEFRWESSDNVNADLSGESPFWIIRREKLDQLLLDEALKNGIEILRPAQVE
HHHHHHHCCEEEEECCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHCCCHHHH
EIISQNKTWRIKCSHKDIYKSKYLVIADGSQSQWAGYFNLGPRKPKFANTIALRLKGLGN
HHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCHHHHHEEEECCCCC
IPKDSVRFEFGFIKYGFAWAFPLKDSVNIGLGTFINNKLLEDEALNNKVLKSFGFEDLSF
CCCCCEEEEEEEEEECEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCH
EKVHKKLRIWNGTHKLNGDRVVAVGDAASLCDPFLAEGIRPSLISSYFAAESIHQCLSSN
HHHHHHHHHCCCCEEECCCEEEEECCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
KSDLNTYSIKINNEWGKSMAWGKRIAQIFYRFPKTGYQLGVKRKTAPKRIAQILSGQMSY
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCH
EDIAKRVIKRLLTNSQG
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]