Click here to switch to the map view.

The map label for this gene is gpmB [H]

Identifier: 123965814

GI number: 123965814

Start: 516026

End: 517354

Strand: Reverse

Name: gpmB [H]

Synonym: P9515_05791

Alternate gene names: 123965814

Gene position: 517354-516026 (Counterclockwise)

Preceding gene: 123965819

Following gene: 123965813

Centisome position: 30.36

GC content: 30.93

Gene sequence:

>1329_bases
ATGAGCGTTAGACTAGTTTTAGTTAGGCATGGACTTAGCAGTTTTAATGAAAAGGGATTAATCCAAGGTAGGACAGATGA
ATCATATTTAACCGATAAAGGTTATGAACAGGCATTGAAGTCGGGGGAGGCATTATCAGATATCAATTTCAACAAGATCT
ATTCATCTCCACTTTCAAGAGCAGCAGAGACAGCAAAAACAATTAAAAAAAACTTAAAAGGAGAAAATAATATAATATAC
GACGAAAATTTACTAGAGGTAGATCTTAGTAAATGGTCTGGTTTAACTATTAATGAAATAAAAAACAAATATCCAGAAAA
ATATCTTCTTTGGAAAACTGATCCTGAAAATTTAAAATTAGATGGTAATGATAATTTGCCGTATCAACCGATCCAAGAAT
TATATTCTCAGGCAAATGAATTCATCAAGAATATTTTAAATATCTATTTAGAAAAAAATGAAGTTAACATTTTAGTTGTT
GGCCACAATGCAATTCTTAGATGTTTAATTCTCTCATTAATTGGTAGACCTCAAAAAGGTTTTAGAAAATTAAAATTGGA
TAATGCCTCTTTTTCAATCCTCAACATTTTAAAGTTTAGAAATTCATTTAAAACACAAATTGAGTGTCTTAATCAGACAT
CTCATCTAAATAAGAAAATACCTGATCAGATTGGCGACTCTAGAATATTCCTAGTAAGACATGGCGAAACTAACTGGAAC
AAAGAAGGCAGATTTCAGGGGCAAATTAATATCCCATTAAACGATAATGGGAAAGATCAGGCGAAAAAAGCTTCTACTTA
CTTAAAGGAAGTAAACTTTAACAAAGCTTTTTCAAGTTCAATGGATAGGCCATATGAAACAGCACAGATAATTCTTCAAA
ACAAATCAGATATAGAAATTAAAAAAATTAAAAAATTAGTAGAGATAAGTCATGGTTTATGGGAAGGCAAGTTAGAAAAT
GAAATTAAAGAACAATGGCCAGAATTACTTAAAAGTTGGCATGAAAAACCTGAAGAGGTAACAATGCCTAAAGGTGAGTC
TATTAGAGAAGTATCTGAGAGATCTATTAAGGCTTGGGAAGAAATTTGTCTTAATCAAAAAAAATATGACTTAACATTAT
TAGTGGCACATGATGCAGTCAACAAAACTCTGATTTGTAATTTATTAGGCATTGATTATTCCAACATATGGATGATAAAA
CAAGGTAATGGAGGTATAACTATTATTGATCTTTTTAATGATCCCCAAAAAGATCATGTTATAAGTGCTCTAAACATCAC
TACACATCTTGGAGGGATATTAGATTCCACAGCATCTGGCGCTCTTTAA

Upstream 100 bases:

>100_bases
TAAAACTAAATTTAGTTTTCATTGAAATTTCTAATAATCTTATACCTATTTTTATCACGCCATGAGATGATTAAAATACT
ACAATTCTTAAATCTATATA

Downstream 100 bases:

>100_bases
AAATGGAGAAAACATTTTTTTTTGAAAATATCAACATTTTAATGGGCCCCAATACAAAGGCATATAAAGATAGTTTGTTA
ATTATTGATGGAAAAATAGA

Product: putative alpha-ribazole-5'-P phosphatase

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSVRLVLVRHGLSSFNEKGLIQGRTDESYLTDKGYEQALKSGEALSDINFNKIYSSPLSRAAETAKTIKKNLKGENNIIY
DENLLEVDLSKWSGLTINEIKNKYPEKYLLWKTDPENLKLDGNDNLPYQPIQELYSQANEFIKNILNIYLEKNEVNILVV
GHNAILRCLILSLIGRPQKGFRKLKLDNASFSILNILKFRNSFKTQIECLNQTSHLNKKIPDQIGDSRIFLVRHGETNWN
KEGRFQGQINIPLNDNGKDQAKKASTYLKEVNFNKAFSSSMDRPYETAQIILQNKSDIEIKKIKKLVEISHGLWEGKLEN
EIKEQWPELLKSWHEKPEEVTMPKGESIREVSERSIKAWEEICLNQKKYDLTLLVAHDAVNKTLICNLLGIDYSNIWMIK
QGNGGITIIDLFNDPQKDHVISALNITTHLGGILDSTASGAL

Sequences:

>Translated_442_residues
MSVRLVLVRHGLSSFNEKGLIQGRTDESYLTDKGYEQALKSGEALSDINFNKIYSSPLSRAAETAKTIKKNLKGENNIIY
DENLLEVDLSKWSGLTINEIKNKYPEKYLLWKTDPENLKLDGNDNLPYQPIQELYSQANEFIKNILNIYLEKNEVNILVV
GHNAILRCLILSLIGRPQKGFRKLKLDNASFSILNILKFRNSFKTQIECLNQTSHLNKKIPDQIGDSRIFLVRHGETNWN
KEGRFQGQINIPLNDNGKDQAKKASTYLKEVNFNKAFSSSMDRPYETAQIILQNKSDIEIKKIKKLVEISHGLWEGKLEN
EIKEQWPELLKSWHEKPEEVTMPKGESIREVSERSIKAWEEICLNQKKYDLTLLVAHDAVNKTLICNLLGIDYSNIWMIK
QGNGGITIIDLFNDPQKDHVISALNITTHLGGILDSTASGAL
>Mature_441_residues
SVRLVLVRHGLSSFNEKGLIQGRTDESYLTDKGYEQALKSGEALSDINFNKIYSSPLSRAAETAKTIKKNLKGENNIIYD
ENLLEVDLSKWSGLTINEIKNKYPEKYLLWKTDPENLKLDGNDNLPYQPIQELYSQANEFIKNILNIYLEKNEVNILVVG
HNAILRCLILSLIGRPQKGFRKLKLDNASFSILNILKFRNSFKTQIECLNQTSHLNKKIPDQIGDSRIFLVRHGETNWNK
EGRFQGQINIPLNDNGKDQAKKASTYLKEVNFNKAFSSSMDRPYETAQIILQNKSDIEIKKIKKLVEISHGLWEGKLENE
IKEQWPELLKSWHEKPEEVTMPKGESIREVSERSIKAWEEICLNQKKYDLTLLVAHDAVNKTLICNLLGIDYSNIWMIKQ
GNGGITIIDLFNDPQKDHVISALNITTHLGGILDSTASGAL

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Homo sapiens, GI9966849, Length=137, Percent_Identity=35.7664233576642, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1790856, Length=164, Percent_Identity=32.3170731707317, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786857, Length=187, Percent_Identity=27.807486631016, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786970, Length=192, Percent_Identity=29.1666666666667, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 50424; Mature: 50293

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLVLVRHGLSSFNEKGLIQGRTDESYLTDKGYEQALKSGEALSDINFNKIYSSPLSR
CCEEEEEECCCHHHCCCCCCEECCCCCCHHCCCHHHHHHHCCCCCCCCCHHHHHCCHHHH
AAETAKTIKKNLKGENNIIYDENLLEVDLSKWSGLTINEIKNKYPEKYLLWKTDPENLKL
HHHHHHHHHHHCCCCCCEEECCCEEEEEHHHCCCCCHHHHHHCCCCCEEEEECCCCCEEE
DGNDNLPYQPIQELYSQANEFIKNILNIYLEKNEVNILVVGHNAILRCLILSLIGRPQKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHCCCHHH
FRKLKLDNASFSILNILKFRNSFKTQIECLNQTSHLNKKIPDQIGDSRIFLVRHGETNWN
HEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCCC
KEGRFQGQINIPLNDNGKDQAKKASTYLKEVNFNKAFSSSMDRPYETAQIILQNKSDIEI
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHEECCCCCCHH
KKIKKLVEISHGLWEGKLENEIKEQWPELLKSWHEKPEEVTMPKGESIREVSERSIKAWE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
EICLNQKKYDLTLLVAHDAVNKTLICNLLGIDYSNIWMIKQGNGGITIIDLFNDPQKDHV
HHHCCCCCCEEEEEEECCCCCCEEEEHEECCCCCCEEEEEECCCCEEEEECCCCCCHHHH
ISALNITTHLGGILDSTASGAL
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SVRLVLVRHGLSSFNEKGLIQGRTDESYLTDKGYEQALKSGEALSDINFNKIYSSPLSR
CEEEEEECCCHHHCCCCCCEECCCCCCHHCCCHHHHHHHCCCCCCCCCHHHHHCCHHHH
AAETAKTIKKNLKGENNIIYDENLLEVDLSKWSGLTINEIKNKYPEKYLLWKTDPENLKL
HHHHHHHHHHHCCCCCCEEECCCEEEEEHHHCCCCCHHHHHHCCCCCEEEEECCCCCEEE
DGNDNLPYQPIQELYSQANEFIKNILNIYLEKNEVNILVVGHNAILRCLILSLIGRPQKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHCCCHHH
FRKLKLDNASFSILNILKFRNSFKTQIECLNQTSHLNKKIPDQIGDSRIFLVRHGETNWN
HEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCCC
KEGRFQGQINIPLNDNGKDQAKKASTYLKEVNFNKAFSSSMDRPYETAQIILQNKSDIEI
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHEECCCCCCHH
KKIKKLVEISHGLWEGKLENEIKEQWPELLKSWHEKPEEVTMPKGESIREVSERSIKAWE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
EICLNQKKYDLTLLVAHDAVNKTLICNLLGIDYSNIWMIKQGNGGITIIDLFNDPQKDHV
HHHCCCCCCEEEEEEECCCCCCEEEEHEECCCCCCEEEEEECCCCEEEEECCCCCCHHHH
ISALNITTHLGGILDSTASGAL
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA