Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965642

Identifier: 123965642

GI number: 123965642

Start: 367782

End: 368582

Strand: Reverse

Name: 123965642

Synonym: P9515_04071

Alternate gene names: NA

Gene position: 368582-367782 (Counterclockwise)

Preceding gene: 123965651

Following gene: 123965636

Centisome position: 21.63

GC content: 31.21

Gene sequence:

>801_bases
ATGAATGTAGGGAGTAACTATAATGATCAATTCTATAAATCACTAACAAATGGGTCATATATTAGTGCCAAGCATTATGT
ATCTATTTTAAGTTCTGTACTTATAAAACCTAATAAAGTTGTTGATATTGGATGTGGCCGAGGGCCATGGTTAAAGGCAT
TTGCTGATTCAGGTGCAAAAGAGTTGGTTGGGATAGATGGTGATTGGGTCTGCCAAGAAAATATGCTTGATAAAAAAATC
AAATTCCATTCAATAGATCTTAGTTCTACTGTCATTAAAAATCCTGTTAATAAGAAATTTGATCTTGCCATGTCACTTGA
AGTGGCCGAGCATTTAAAACCAGAACAAGCAACTACCTTTGTCAATTACTTAACAAACTTTTCTGAAACAATTCTATTTA
GCGCTGCTTTTAGTGGTCAAGGAGGTACTGATCATTTTAATGAGAGACCGCATTCTTACTGGGCTAAAATTTTCATCAAA
AATGGTTACTTGCCCTATGATCTTTTTCGTTCAAAGGTATGGGAAAATCAAGAGATAGAAGTTTGGTACCGTCAAAATAC
TTTTTTATACCTAAAAAGTAATTCAAAATTTGAAAAAATATTTAAAGAAAAAGGTATAGAGCCTATTAGAGAAACAGCCC
TTATGAACTATATTCATCCAGATTTATATCAAATAAGGGTAGAAGAATCTAAGCAATTAACTCAATTAATTATTAAATTA
AGAAAATCAACTATATCAGGTCTTATAAAAAGGATTATGCCTAAATCCATAGTTAACTTTTTAAGGAAAATTCGGAAATA
A

Upstream 100 bases:

>100_bases
AGTTTATTTTGCAGAACCTGTAGATTATGTATTTATTTGAATCAAAACTTTTGTAATAAGCTATATTATTTAGGTTAATG
ATTTCTCGAGAAAAGATTAT

Downstream 100 bases:

>100_bases
AATATTAACTATGAATCAAATAAAATGTTTTGCATAGTTACTATTAATTCTCATTGATTTTTCAATAGATCATCACCATT
CTATTTGTTTTCATGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAKELVGIDGDWVCQENMLDKKI
KFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTFVNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIK
NGYLPYDLFRSKVWENQEIEVWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL
RKSTISGLIKRIMPKSIVNFLRKIRK

Sequences:

>Translated_266_residues
MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAKELVGIDGDWVCQENMLDKKI
KFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTFVNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIK
NGYLPYDLFRSKVWENQEIEVWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL
RKSTISGLIKRIMPKSIVNFLRKIRK
>Mature_266_residues
MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAKELVGIDGDWVCQENMLDKKI
KFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTFVNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIK
NGYLPYDLFRSKVWENQEIEVWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL
RKSTISGLIKRIMPKSIVNFLRKIRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30751; Mature: 30751

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAK
CCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCH
ELVGIDGDWVCQENMLDKKIKFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTF
HEECCCCCEEECHHHHHHHHEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
VNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIKNGYLPYDLFRSKVWENQEIE
HHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCEE
VWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL
EEEECCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH
RKSTISGLIKRIMPKSIVNFLRKIRK
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAK
CCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCH
ELVGIDGDWVCQENMLDKKIKFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTF
HEECCCCCEEECHHHHHHHHEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
VNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIKNGYLPYDLFRSKVWENQEIE
HHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCEE
VWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL
EEEECCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH
RKSTISGLIKRIMPKSIVNFLRKIRK
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA