| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965652
Identifier: 123965652
GI number: 123965652
Start: 374611
End: 375204
Strand: Reverse
Name: 123965652
Synonym: P9515_04171
Alternate gene names: NA
Gene position: 375204-374611 (Counterclockwise)
Preceding gene: 123965653
Following gene: 123965651
Centisome position: 22.02
GC content: 31.14
Gene sequence:
>594_bases GTGTATGTAGTAGATGTAACTAGAAAAGATTGGTTTCAAAGCAATTCTGTACAAGGTTGGGTAGATATTTTAAATAAAGT TAAAGATACAGTTAATATTGCACTGGTAGAAAACAATTCTACAAAAATTGATTTTATTGGTCATAGTTCTGGTGGAGTAA TGATGAGACTCTATCTTTCTGATGAACCTTTTAACAATAAGATATTTAATGGGAAGTCTCATACTAAAAATTTAATTACA TTAGGTAGCCCACATCAAGCTGTAAAAGCAACCGCATTGAGAAAATTTGTGGATGAAAAATATCCAGGAAATTTCTTCAA AAATATAAATTATATTTCAGTTGGAGGTGAAGTAGAAATTAAATCTAAACAAACATCATTAATAACAAAACTTGTTGCGA GGGGATCATATAAATCAATTTCTGGAGATAAGAATGCTAATGGAGACGGCTTAGTTCCTTTGTCATCATCTCTTTTAGAA GGTTCACAGCAAATAATTCTTCCTGAAACAGTACATGGTGGTCTTTTTGGAAATAACTGGTATTGCTCCTCTTCAAAAGT AAGAGAATGGTGGAAACAAATACATTGGAAATAA
Upstream 100 bases:
>100_bases AAAAATTAAAAATCCAATAATTATTCTCGGTGGTTTTCTGATTACTAAAGAAGCCTATAACGAAGCTAAAAATATAATTG AGAATGTTTTTAACAGAAAA
Downstream 100 bases:
>100_bases AGCTATTTTACTTTTTGTATTAACTTTTGATTTATTCATCAACTAAAAGTATTTATTGCAAATATATTATTTAAAAATAG ATTGATTTTTGTGGTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MYVVDVTRKDWFQSNSVQGWVDILNKVKDTVNIALVENNSTKIDFIGHSSGGVMMRLYLSDEPFNNKIFNGKSHTKNLIT LGSPHQAVKATALRKFVDEKYPGNFFKNINYISVGGEVEIKSKQTSLITKLVARGSYKSISGDKNANGDGLVPLSSSLLE GSQQIILPETVHGGLFGNNWYCSSSKVREWWKQIHWK
Sequences:
>Translated_197_residues MYVVDVTRKDWFQSNSVQGWVDILNKVKDTVNIALVENNSTKIDFIGHSSGGVMMRLYLSDEPFNNKIFNGKSHTKNLIT LGSPHQAVKATALRKFVDEKYPGNFFKNINYISVGGEVEIKSKQTSLITKLVARGSYKSISGDKNANGDGLVPLSSSLLE GSQQIILPETVHGGLFGNNWYCSSSKVREWWKQIHWK >Mature_197_residues MYVVDVTRKDWFQSNSVQGWVDILNKVKDTVNIALVENNSTKIDFIGHSSGGVMMRLYLSDEPFNNKIFNGKSHTKNLIT LGSPHQAVKATALRKFVDEKYPGNFFKNINYISVGGEVEIKSKQTSLITKLVARGSYKSISGDKNANGDGLVPLSSSLLE GSQQIILPETVHGGLFGNNWYCSSSKVREWWKQIHWK
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22069; Mature: 22069
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVDVTRKDWFQSNSVQGWVDILNKVKDTVNIALVENNSTKIDFIGHSSGGVMMRLYLS CEEEECCHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCCEEEEEEEC DEPFNNKIFNGKSHTKNLITLGSPHQAVKATALRKFVDEKYPGNFFKNINYISVGGEVEI CCCCCCCEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCEEEE KSKQTSLITKLVARGSYKSISGDKNANGDGLVPLSSSLLEGSQQIILPETVHGGLFGNNW CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCCCE YCSSSKVREWWKQIHWK EECCHHHHHHHHHHCCC >Mature Secondary Structure MYVVDVTRKDWFQSNSVQGWVDILNKVKDTVNIALVENNSTKIDFIGHSSGGVMMRLYLS CEEEECCHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCCEEEEEEEC DEPFNNKIFNGKSHTKNLITLGSPHQAVKATALRKFVDEKYPGNFFKNINYISVGGEVEI CCCCCCCEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCEEEE KSKQTSLITKLVARGSYKSISGDKNANGDGLVPLSSSLLEGSQQIILPETVHGGLFGNNW CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCCCE YCSSSKVREWWKQIHWK EECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA