| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is secE
Identifier: 123965470
GI number: 123965470
Start: 215517
End: 215774
Strand: Reverse
Name: secE
Synonym: P9515_02351
Alternate gene names: NA
Gene position: 215774-215517 (Counterclockwise)
Preceding gene: 123965471
Following gene: 123965469
Centisome position: 12.66
GC content: 37.21
Gene sequence:
>258_bases GTGTCAAGTCCTACTAATCAAAAACCTCTTAAAAAAGAGCCCTCTGAAATAAAAGAGCCCTCTGAAATAAAAGAGCCCAA GAAAAAGAAGAATTTTTTAACTTCCACAGTCGATGAACTTAAACTAGTTGTGTGGCCTAACAAACAACAGTTATTTAGCG AATCTGTTGCTGTTATCATTATGGTATCCTTTTCTGCAGCTGCAATTGCATCTGTGAGCAGATTTTATGGATGGGCCGCA TCACAAATTTTCCGTTAA
Upstream 100 bases:
>100_bases CTTCAAAAAAAGATGAGATTTTATTTAAACCTAGCTGATGAGTAAATCAATGAGCTAAAATAGTTTTAAGCTTTCGAAGC CTATACTAAAATAAAATTTT
Downstream 100 bases:
>100_bases ATTAAAAAAATTTTTAAATATAGATTTAATCCTATAATTTTAAAAAGATTATTTATCCAGTTTCCAGAGTAAGAAAAATG AGTAATGAATTAACAGCAAA
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSSPTNQKPLKKEPSEIKEPSEIKEPKKKKNFLTSTVDELKLVVWPNKQQLFSESVAVIIMVSFSAAAIASVSRFYGWAA SQIFR
Sequences:
>Translated_85_residues MSSPTNQKPLKKEPSEIKEPSEIKEPKKKKNFLTSTVDELKLVVWPNKQQLFSESVAVIIMVSFSAAAIASVSRFYGWAA SQIFR >Mature_84_residues SSPTNQKPLKKEPSEIKEPSEIKEPKKKKNFLTSTVDELKLVVWPNKQQLFSESVAVIIMVSFSAAAIASVSRFYGWAAS QIFR
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9572; Mature: 9441
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPTNQKPLKKEPSEIKEPSEIKEPKKKKNFLTSTVDELKLVVWPNKQQLFSESVAVII CCCCCCCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCEEEE MVSFSAAAIASVSRFYGWAASQIFR EEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSPTNQKPLKKEPSEIKEPSEIKEPKKKKNFLTSTVDELKLVVWPNKQQLFSESVAVII CCCCCCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCEEEE MVSFSAAAIASVSRFYGWAASQIFR EEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA