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The map label for this gene is nusG [H]

Identifier: 123965469

GI number: 123965469

Start: 214828

End: 215439

Strand: Reverse

Name: nusG [H]

Synonym: P9515_02341

Alternate gene names: 123965469

Gene position: 215439-214828 (Counterclockwise)

Preceding gene: 123965470

Following gene: 123965468

Centisome position: 12.64

GC content: 36.27

Gene sequence:

>612_bases
ATGAGTAATGAATTAACAGCAAATCTTGGTTCCCAAAAGGCCAATACCAGTATTGCTAGGTGGTATGCCGTTCAAGTTGC
TTCCAGCTGTGAAAAGAAAGTAAAAGCTACTCTCGAACAAAGGTCAGTAACTTTAGGTGTTAATAATAGAATTATAGAGA
TTGAGATTCCTCAAACTCCCGGAATTAAACTTAAGAAAGATGGATCCAGACAAACAACAGAGGAGAAGGTTTTCCCTGGT
TACGTGTTGGTTAGGATGATTTTGGATGAAGATACCATGATGGCTGTAAAAAGTACTCCAAATGTTATTAATTTTGTTGG
AGCTGAAGATGGGAGAGGCAGTGGTAGATCACGAGGGCATATCAAACCTCGACCATTATCTAGGCAAGAGGTAAATAGAA
TATTTAAGCGCGCCTCAGAGAAGAAAGCTGTAATAAAATTAGATCTTGAAGAAAAAGATAGAATTATTGTTACGAGTGGA
CCTTTTAAAGATTTTCAGGGTGAAGTAATAGAAGTTTCGGGAGAAAGAAATAAATTAAAAGCATTACTTTCAATATTTGG
GCGCGAAACTCCTGTAGAATTAGAATTCTCGCAAATCAATAAACAAAATTAA

Upstream 100 bases:

>100_bases
CCGCATCACAAATTTTCCGTTAAATTAAAAAAATTTTTAAATATAGATTTAATCCTATAATTTTAAAAAGATTATTTATC
CAGTTTCCAGAGTAAGAAAA

Downstream 100 bases:

>100_bases
TTATTATTTCTGTTTATCGAGTAAAATAATCATTTTAACTATCGTTTTAATTCAAGAAATCTAATGGCAAAAAAAATCGT
TGCGGTTATTAAACTAGCAT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSNELTANLGSQKANTSIARWYAVQVASSCEKKVKATLEQRSVTLGVNNRIIEIEIPQTPGIKLKKDGSRQTTEEKVFPG
YVLVRMILDEDTMMAVKSTPNVINFVGAEDGRGSGRSRGHIKPRPLSRQEVNRIFKRASEKKAVIKLDLEEKDRIIVTSG
PFKDFQGEVIEVSGERNKLKALLSIFGRETPVELEFSQINKQN

Sequences:

>Translated_203_residues
MSNELTANLGSQKANTSIARWYAVQVASSCEKKVKATLEQRSVTLGVNNRIIEIEIPQTPGIKLKKDGSRQTTEEKVFPG
YVLVRMILDEDTMMAVKSTPNVINFVGAEDGRGSGRSRGHIKPRPLSRQEVNRIFKRASEKKAVIKLDLEEKDRIIVTSG
PFKDFQGEVIEVSGERNKLKALLSIFGRETPVELEFSQINKQN
>Mature_202_residues
SNELTANLGSQKANTSIARWYAVQVASSCEKKVKATLEQRSVTLGVNNRIIEIEIPQTPGIKLKKDGSRQTTEEKVFPGY
VLVRMILDEDTMMAVKSTPNVINFVGAEDGRGSGRSRGHIKPRPLSRQEVNRIFKRASEKKAVIKLDLEEKDRIIVTSGP
FKDFQGEVIEVSGERNKLKALLSIFGRETPVELEFSQINKQN

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=184, Percent_Identity=36.4130434782609, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 22714; Mature: 22583

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELTANLGSQKANTSIARWYAVQVASSCEKKVKATLEQRSVTLGVNNRIIEIEIPQTP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCC
GIKLKKDGSRQTTEEKVFPGYVLVRMILDEDTMMAVKSTPNVINFVGAEDGRGSGRSRGH
CEEEECCCCCCCCHHHCCCHHHEEHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC
IKPRPLSRQEVNRIFKRASEKKAVIKLDLEEKDRIIVTSGPFKDFQGEVIEVSGERNKLK
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCHHHHH
ALLSIFGRETPVELEFSQINKQN
HHHHHHCCCCCCEEEHHHCCCCC
>Mature Secondary Structure 
SNELTANLGSQKANTSIARWYAVQVASSCEKKVKATLEQRSVTLGVNNRIIEIEIPQTP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCC
GIKLKKDGSRQTTEEKVFPGYVLVRMILDEDTMMAVKSTPNVINFVGAEDGRGSGRSRGH
CEEEECCCCCCCCHHHCCCHHHEEHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC
IKPRPLSRQEVNRIFKRASEKKAVIKLDLEEKDRIIVTSGPFKDFQGEVIEVSGERNKLK
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCHHHHH
ALLSIFGRETPVELEFSQINKQN
HHHHHHCCCCCCEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7685084; 8905231; 7505271 [H]