| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is purE [H]
Identifier: 123965431
GI number: 123965431
Start: 179114
End: 179605
Strand: Reverse
Name: purE [H]
Synonym: P9515_01961
Alternate gene names: 123965431
Gene position: 179605-179114 (Counterclockwise)
Preceding gene: 123965433
Following gene: 123965428
Centisome position: 10.54
GC content: 35.16
Gene sequence:
>492_bases ATGGGAAGTGATTCAGATCTAAAAACTTTGAAACCTTCAGTTGATATATTGCATGAATTTGGAATAGAAACAGAAGTTTG TATACTTTCAGCACATCGAACCCCAATTGAAATGATGGAATATGCAAAAAAGGCAGAATCAAAAAATATAAAGGTTATTG TAGCTGGAGCTGGTGGGGCTGCTCACTTGCCTGGGATGTTAGCTTCACTAACATGTATTCCCGTTATAGGGGTGCCCGTA GAAAGTAAAACTCTGAAAGGAATCGACTCCCTATTATCAATTGTTCAAATGCCTGCAGGAATTCCAGTAGCAACAGTAGC CATAAACGGAGCAAAAAATGCTGGGCTTTTAGCAATTCAAATCCTTTGTTTATTTGACGAAGGTTTAAGGATAAAAATGA AAAAATTTAGAGATAATCTGCATGCACAAGTAAGAACTAAAAACAGTAAATTATTTACTTTAGGGACTGATAATTATCTA AAAACTTACTAA
Upstream 100 bases:
>100_bases TAACTAGCGCGCAGGTAATTGCACGTCATTATAAGAAAAGAATTGATTTGTTATTTTGTCAGACTTGAATTCCAGCAATA TTTCTAAAGTTGCGGTAGTA
Downstream 100 bases:
>100_bases AAAATTTTTATAAATTAAACATTTGCAAGTAAATTCTTTTCTCTAAGATAATTTATAACTGTTTCAACAGAATCATTTAA ATCTAAAGAACCTGTATCAA
Product: phosphoribosylaminoimidazole carboxylase
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MGSDSDLKTLKPSVDILHEFGIETEVCILSAHRTPIEMMEYAKKAESKNIKVIVAGAGGAAHLPGMLASLTCIPVIGVPV ESKTLKGIDSLLSIVQMPAGIPVATVAINGAKNAGLLAIQILCLFDEGLRIKMKKFRDNLHAQVRTKNSKLFTLGTDNYL KTY
Sequences:
>Translated_163_residues MGSDSDLKTLKPSVDILHEFGIETEVCILSAHRTPIEMMEYAKKAESKNIKVIVAGAGGAAHLPGMLASLTCIPVIGVPV ESKTLKGIDSLLSIVQMPAGIPVATVAINGAKNAGLLAIQILCLFDEGLRIKMKKFRDNLHAQVRTKNSKLFTLGTDNYL KTY >Mature_162_residues GSDSDLKTLKPSVDILHEFGIETEVCILSAHRTPIEMMEYAKKAESKNIKVIVAGAGGAAHLPGMLASLTCIPVIGVPVE SKTLKGIDSLLSIVQMPAGIPVATVAINGAKNAGLLAIQILCLFDEGLRIKMKKFRDNLHAQVRTKNSKLFTLGTDNYLK TY
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=106, Percent_Identity=52.8301886792453, Blast_Score=120, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6324702, Length=162, Percent_Identity=52.4691358024691, Blast_Score=168, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 17504; Mature: 17373
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDSDLKTLKPSVDILHEFGIETEVCILSAHRTPIEMMEYAKKAESKNIKVIVAGAGGA CCCCCCCHHCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCC AHLPGMLASLTCIPVIGVPVESKTLKGIDSLLSIVQMPAGIPVATVAINGAKNAGLLAIQ HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEEE ILCLFDEGLRIKMKKFRDNLHAQVRTKNSKLFTLGTDNYLKTY EEEHHCCCCEEEHHHHHCCCEEEEEECCCEEEEECCCCCEECC >Mature Secondary Structure GSDSDLKTLKPSVDILHEFGIETEVCILSAHRTPIEMMEYAKKAESKNIKVIVAGAGGA CCCCCCHHCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCC AHLPGMLASLTCIPVIGVPVESKTLKGIDSLLSIVQMPAGIPVATVAINGAKNAGLLAIQ HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEEE ILCLFDEGLRIKMKKFRDNLHAQVRTKNSKLFTLGTDNYLKTY EEEHHCCCCEEEHHHHHCCCEEEEEECCCEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]