| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is plsY
Identifier: 121999107
GI number: 121999107
Start: 2555157
End: 2555750
Strand: Reverse
Name: plsY
Synonym: Hhal_2329
Alternate gene names: 121999107
Gene position: 2555750-2555157 (Counterclockwise)
Preceding gene: 121999109
Following gene: 121999106
Centisome position: 95.42
GC content: 70.2
Gene sequence:
>594_bases ATGCTGGATGTCATCCTCGTCATCATCGGTTATCTCATCGGTTCCATCTCCTCGGCGATCGTCGTCTGCCGGGCGATGAA CCTCGGCGACCCGCGCCAGGGCGGCTCGGGCAATCCCGGGGCGACCAACGTCCTGCGCCTGGCCGGCAAGGTCCCTGCCG GCATCACCCTGCTCGGCGACTGGCTCAAGGGCACCCTCCCGGTGCTGCTGGCCTGGCTCGCCACCGAGGACCCGGTGGTG GCCAGCGCCGCCGGTCTGGCAGCGTTCTTTGGCCACCTCTTTCCGGTCTACTTCCGGTTCCAGGGGGGGAAGGGCGTGGC CACCGGCCTGGGGGTGATCCTCGCCTGGTCCCCGCTGGCGCTGTTGGCCACGGTGGTCACCTGGCTGGCGGTGGCCGGCG CCTTCCGCTACTCCTCCCTGGCCGCCGTGGTGGCCTTTGCCATGGCCCCGATCTACATGCTCTGGCTGTCGGCCTCGCCG GTGCTCACCGCGGCCACGGCGATCCTCACGGCGGCCATCGTCTGGCGCCACCGCGAGAACATCGTCCGCCTCGCCGCCGG TGAGGAGAGCCGCATCGGTTCCTCGGGGTCATGA
Upstream 100 bases:
>100_bases ATCGTCTGCCCGGCGTTTCCGGTATACGGTGGAGGGCGGCCGCGCCGCTCGGGGGAACCCAACACTTGCAACGCGTGACG GATCTACAGAGACTTGCGCC
Downstream 100 bases:
>100_bases ACGAGTGCCCGCCCGGTACCCGTCCATTCCGGGTCCGGCACGCCGCTGCGGAGCTGCGCCAGGGCGGCGTGGTGGCCTAT CCCACCGAGGCGGTCTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLDVILVIIGYLIGSISSAIVVCRAMNLGDPRQGGSGNPGATNVLRLAGKVPAGITLLGDWLKGTLPVLLAWLATEDPVV ASAAGLAAFFGHLFPVYFRFQGGKGVATGLGVILAWSPLALLATVVTWLAVAGAFRYSSLAAVVAFAMAPIYMLWLSASP VLTAATAILTAAIVWRHRENIVRLAAGEESRIGSSGS
Sequences:
>Translated_197_residues MLDVILVIIGYLIGSISSAIVVCRAMNLGDPRQGGSGNPGATNVLRLAGKVPAGITLLGDWLKGTLPVLLAWLATEDPVV ASAAGLAAFFGHLFPVYFRFQGGKGVATGLGVILAWSPLALLATVVTWLAVAGAFRYSSLAAVVAFAMAPIYMLWLSASP VLTAATAILTAAIVWRHRENIVRLAAGEESRIGSSGS >Mature_197_residues MLDVILVIIGYLIGSISSAIVVCRAMNLGDPRQGGSGNPGATNVLRLAGKVPAGITLLGDWLKGTLPVLLAWLATEDPVV ASAAGLAAFFGHLFPVYFRFQGGKGVATGLGVILAWSPLALLATVVTWLAVAGAFRYSSLAAVVAFAMAPIYMLWLSASP VLTAATAILTAAIVWRHRENIVRLAAGEESRIGSSGS
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=189, Percent_Identity=45.5026455026455, Blast_Score=141, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_HALHL (A1WZI0)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003894.1 - STRING: A1WZI0 - GeneID: 4709272 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_2329 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: SRIGEKK - PhylomeDB: A1WZI0 - ProtClustDB: CLSK2392163 - BioCyc: HHAL349124:HHAL_2329-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 20343; Mature: 20343
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c24f1b4)-; HASH(0x1c6f773c)-; HASH(0x1b0c3b64)-; HASH(0x1c4a07d4)-; HASH(0x1c2779fc)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVILVIIGYLIGSISSAIVVCRAMNLGDPRQGGSGNPGATNVLRLAGKVPAGITLLGD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH WLKGTLPVLLAWLATEDPVVASAAGLAAFFGHLFPVYFRFQGGKGVATGLGVILAWSPLA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH LLATVVTWLAVAGAFRYSSLAAVVAFAMAPIYMLWLSASPVLTAATAILTAAIVWRHREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC IVRLAAGEESRIGSSGS EEEEECCCCCCCCCCCH >Mature Secondary Structure MLDVILVIIGYLIGSISSAIVVCRAMNLGDPRQGGSGNPGATNVLRLAGKVPAGITLLGD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH WLKGTLPVLLAWLATEDPVVASAAGLAAFFGHLFPVYFRFQGGKGVATGLGVILAWSPLA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH LLATVVTWLAVAGAFRYSSLAAVVAFAMAPIYMLWLSASPVLTAATAILTAAIVWRHREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC IVRLAAGEESRIGSSGS EEEEECCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA