| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is proA
Identifier: 121998921
GI number: 121998921
Start: 2342443
End: 2343717
Strand: Reverse
Name: proA
Synonym: Hhal_2142
Alternate gene names: 121998921
Gene position: 2343717-2342443 (Counterclockwise)
Preceding gene: 121998922
Following gene: 121998920
Centisome position: 87.5
GC content: 71.14
Gene sequence:
>1275_bases ATGAGTGCAGAGCATTCGAGCGACATCGCCGAGACCATTCGCCGGATCGGGCAGCAGGCCCGCGCCGCCGGGCGCGCCCT GGCCCGCTCCGGGACCGGTGCGCGCAACGACGCCCTGGCCGCCATCGCCGCCCGTATCGAGGCCGGCTCCGAGGCCATCG CCGCGGCCAACGCGGCGGACCTGGAGGCCGCCCGCGAGGCCGGGCTCGACCCGGCCCTGATCGATCGCATGGAGCTCACT CCGGGCCGCATCCAGGCCATGGCCGACGGGCTGCGCGAGATCGCGGCGCTGCCGGATCCGGTGGGTGCGGTGCGCGAGCT GGCGTCACGGCCCTCGGGGATCCAGGTCGGGCGGATGCGCATGCCCATCGGGGTGATCGGCATCATCTACGAGTCGCGCC CCAACGTCACCGCCGATGCCGCCGGGCTGTGCATCAAATCCGGCAACGCCACGATCCTGCGCGGCGGCTCCGAGGCGATC CGCTCCAACCGGGCCATCGCCGAGCAGATTCGCGCCGGGCTAGAGGACGCTGGGTTGCCGGGGGACGGTGTCCAGGTGGT CGGGACCACCGACCGGGATGCTGTCGGCGCCCTGATCCAGATGCCTGAGTCGGTGGACGTGATCGTCCCCCGCGGCGGCA AGGGCCTGGTCGAGCGCATCGCCCGCGAGGCGCGGGTGCCGGTGATCAAGCACCTCGACGGTGTCTGCCACGTCTACATC GACGAGGCCGCCGATACCGAGAAAGCGGTGGCCATTGCCGTCAACGCCAAGACCCAGCGGCTGGGGACCTGCAACACCAT GGAGACACTGCTGGTGGCCGAGGCGGCCGCCGAGCGGGTGCTGCCGGAGGTTGGACGTCAGCTGCGCGATGCCGGGATCG AGGTGCGCGGCTGCGAGCGCACACGCGCCCTGATCGACGAGGCGGTGCCCGCTACCGAAGAAGACTGGACCACCGAGTAT CTCGGGCCCACCCTTGCGGTACGTGTGGTGGCCGGGTTCGACGACGCCGTGGCGCACATCGAGCGCTACAGCTCCGGGCA CACCGAGGCCATCGTCACCGAGAGCTATCCGCTGGCGCAGCGCTTCCTGCGCGAGGTGGACTCCAGTTCGGTGATGGTCA ACGCCTCGACCCGCTTCGCCGACGGTCAGGAGTACGGCCTCGGCGCCGAGATCGGGATCAGCACCGACAAGCTCCACGCC CGGGGCCCGGTGGGGCTGGAGGGGCTGACCACCGAGAAGTGGATCGTCCTCGGTGACGGTCACGTCCGCAGCTGA
Upstream 100 bases:
>100_bases GAGCAGCTGCGGGCCCTGGTCTCTCGTCTGGCCCGCGCCATGGCAAAATAGCGCCAATCGGTACACCATATCCCCGATCG AGCCCATTTGAGCAGACCTG
Downstream 100 bases:
>100_bases CGGCGAGGTGAGCGGACGCGTGAGACAACCGCTGCGTACTATTGGCCTGCTCGGTGGCACGTTCGATCCCATCCACTACG GCCACCTGCGCCCGGCCGAG
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSAEHSSDIAETIRRIGQQARAAGRALARSGTGARNDALAAIAARIEAGSEAIAAANAADLEAAREAGLDPALIDRMELT PGRIQAMADGLREIAALPDPVGAVRELASRPSGIQVGRMRMPIGVIGIIYESRPNVTADAAGLCIKSGNATILRGGSEAI RSNRAIAEQIRAGLEDAGLPGDGVQVVGTTDRDAVGALIQMPESVDVIVPRGGKGLVERIAREARVPVIKHLDGVCHVYI DEAADTEKAVAIAVNAKTQRLGTCNTMETLLVAEAAAERVLPEVGRQLRDAGIEVRGCERTRALIDEAVPATEEDWTTEY LGPTLAVRVVAGFDDAVAHIERYSSGHTEAIVTESYPLAQRFLREVDSSSVMVNASTRFADGQEYGLGAEIGISTDKLHA RGPVGLEGLTTEKWIVLGDGHVRS
Sequences:
>Translated_424_residues MSAEHSSDIAETIRRIGQQARAAGRALARSGTGARNDALAAIAARIEAGSEAIAAANAADLEAAREAGLDPALIDRMELT PGRIQAMADGLREIAALPDPVGAVRELASRPSGIQVGRMRMPIGVIGIIYESRPNVTADAAGLCIKSGNATILRGGSEAI RSNRAIAEQIRAGLEDAGLPGDGVQVVGTTDRDAVGALIQMPESVDVIVPRGGKGLVERIAREARVPVIKHLDGVCHVYI DEAADTEKAVAIAVNAKTQRLGTCNTMETLLVAEAAAERVLPEVGRQLRDAGIEVRGCERTRALIDEAVPATEEDWTTEY LGPTLAVRVVAGFDDAVAHIERYSSGHTEAIVTESYPLAQRFLREVDSSSVMVNASTRFADGQEYGLGAEIGISTDKLHA RGPVGLEGLTTEKWIVLGDGHVRS >Mature_423_residues SAEHSSDIAETIRRIGQQARAAGRALARSGTGARNDALAAIAARIEAGSEAIAAANAADLEAAREAGLDPALIDRMELTP GRIQAMADGLREIAALPDPVGAVRELASRPSGIQVGRMRMPIGVIGIIYESRPNVTADAAGLCIKSGNATILRGGSEAIR SNRAIAEQIRAGLEDAGLPGDGVQVVGTTDRDAVGALIQMPESVDVIVPRGGKGLVERIAREARVPVIKHLDGVCHVYID EAADTEKAVAIAVNAKTQRLGTCNTMETLLVAEAAAERVLPEVGRQLRDAGIEVRGCERTRALIDEAVPATEEDWTTEYL GPTLAVRVVAGFDDAVAHIERYSSGHTEAIVTESYPLAQRFLREVDSSSVMVNASTRFADGQEYGLGAEIGISTDKLHAR GPVGLEGLTTEKWIVLGDGHVRS
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family
Homologues:
Organism=Homo sapiens, GI62912457, Length=416, Percent_Identity=37.0192307692308, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI21361368, Length=416, Percent_Identity=37.0192307692308, Blast_Score=260, Evalue=1e-69, Organism=Escherichia coli, GI1786438, Length=416, Percent_Identity=44.4711538461538, Blast_Score=363, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17569969, Length=414, Percent_Identity=38.4057971014493, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17569967, Length=414, Percent_Identity=38.4057971014493, Blast_Score=279, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6324899, Length=431, Percent_Identity=39.4431554524362, Blast_Score=296, Evalue=3e-81, Organism=Drosophila melanogaster, GI21357643, Length=409, Percent_Identity=37.6528117359413, Blast_Score=264, Evalue=7e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROA_HALHL (A1WYZ4)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003708.1 - ProteinModelPortal: A1WYZ4 - SMR: A1WYZ4 - STRING: A1WYZ4 - GeneID: 4711339 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_2142 - eggNOG: COG0014 - HOGENOM: HBG318080 - OMA: GICGAME - PhylomeDB: A1WYZ4 - BioCyc: HHAL349124:HHAL_2142-MONOMER - GO: GO:0005737 - HAMAP: MF_00412 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 - Gene3D: G3DSA:3.40.309.10 - Gene3D: G3DSA:3.40.605.10 - PANTHER: PTHR11063:SF1 - PIRSF: PIRSF000151 - TIGRFAMs: TIGR00407
Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.2.1.41
Molecular weight: Translated: 44592; Mature: 44461
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEHSSDIAETIRRIGQQARAAGRALARSGTGARNDALAAIAARIEAGSEAIAAANAAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHH LEAAREAGLDPALIDRMELTPGRIQAMADGLREIAALPDPVGAVRELASRPSGIQVGRMR HHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECEEE MPIGVIGIIYESRPNVTADAAGLCIKSGNATILRGGSEAIRSNRAIAEQIRAGLEDAGLP CCEEEEEEEEECCCCCCCCCCCEEEECCCEEEEECCHHHHHCCHHHHHHHHCCHHHCCCC GDGVQVVGTTDRDAVGALIQMPESVDVIVPRGGKGLVERIAREARVPVIKHLDGVCHVYI CCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCEEEEEE DEAADTEKAVAIAVNAKTQRLGTCNTMETLLVAEAAAERVLPEVGRQLRDAGIEVRGCER ECCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHH TRALIDEAVPATEEDWTTEYLGPTLAVRVVAGFDDAVAHIERYSSGHTEAIVTESYPLAQ HHHHHHHCCCCCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCHHHH RFLREVDSSSVMVNASTRFADGQEYGLGAEIGISTDKLHARGPVGLEGLTTEKWIVLGDG HHHHHCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCC HVRS CCCC >Mature Secondary Structure SAEHSSDIAETIRRIGQQARAAGRALARSGTGARNDALAAIAARIEAGSEAIAAANAAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHH LEAAREAGLDPALIDRMELTPGRIQAMADGLREIAALPDPVGAVRELASRPSGIQVGRMR HHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECEEE MPIGVIGIIYESRPNVTADAAGLCIKSGNATILRGGSEAIRSNRAIAEQIRAGLEDAGLP CCEEEEEEEEECCCCCCCCCCCEEEECCCEEEEECCHHHHHCCHHHHHHHHCCHHHCCCC GDGVQVVGTTDRDAVGALIQMPESVDVIVPRGGKGLVERIAREARVPVIKHLDGVCHVYI CCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCEEEEEE DEAADTEKAVAIAVNAKTQRLGTCNTMETLLVAEAAAERVLPEVGRQLRDAGIEVRGCER ECCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHH TRALIDEAVPATEEDWTTEYLGPTLAVRVVAGFDDAVAHIERYSSGHTEAIVTESYPLAQ HHHHHHHCCCCCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCHHHH RFLREVDSSSVMVNASTRFADGQEYGLGAEIGISTDKLHARGPVGLEGLTTEKWIVLGDG HHHHHCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCC HVRS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA