| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is nadD
Identifier: 121998920
GI number: 121998920
Start: 2341767
End: 2342423
Strand: Reverse
Name: nadD
Synonym: Hhal_2141
Alternate gene names: 121998920
Gene position: 2342423-2341767 (Counterclockwise)
Preceding gene: 121998921
Following gene: 121998919
Centisome position: 87.45
GC content: 72.3
Gene sequence:
>657_bases GTGAGACAACCGCTGCGTACTATTGGCCTGCTCGGTGGCACGTTCGATCCCATCCACTACGGCCACCTGCGCCCGGCCGA GGAGGTCCGCGAGGCCGTGCAGCTCTCCGAGCTGCGCCTGATCCCGGCGCGCATCCCGCCCCACCGGGCCCGTCCGCGGG TCGGGCCCGAGCAGCGCGCCGAACTGGTGCGCCGGGCCGTGGCCGACAACCCCAGCGCCTGCGTCGATGAGCGGGAGCTG CACCGCGATGGGCCCTCCTACACCGTCGACACCCTGGCCGAGCTTCGCGCCGAGCTCGGTGGTGTCTCGCTGTGCCTGAT CCTCGGGTACGACACTTTTCTCGGGCTGCCTGGCTGGTCCCGCTGGCGGCAGCTGTTCGAACGGGCCCACGTGGTGGTCA CCGAGCGGCCCGGGGTGCGAGGCGCGCTGCCCGAGGCGCTGGCCACCGAGGTGGCCAGGCGGGTTGCGCACGAGCCGGCC GAGCTGCGCCATCGTCCGGCCGGTTGCATCCTGTTTCAGGCGGTGACACCGGTGGATATCTCCGCTACGGGGATCCGCCG CTCCCTGGCGCTGGGCCGGTCCGTGCGCTATCTGCTGCCCGAGGCGGTGCGGCAGCGGGTGGTCGAGGCGGGCTGGTACG GCTACCCGCAGTTGTAA
Upstream 100 bases:
>100_bases CACGCCCGGGGCCCGGTGGGGCTGGAGGGGCTGACCACCGAGAAGTGGATCGTCCTCGGTGACGGTCACGTCCGCAGCTG ACGGCGAGGTGAGCGGACGC
Downstream 100 bases:
>100_bases GAGGTCGTCATGGTGGTGGAAGAGCTGGAGCAACGGATCCGCGAGTCCCTGGACGCGATCAAGGCCCAGGATACGGTGGC CATCGATGTCCGCGGGCGTA
Product: nicotinate (nicotinamide) nucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRQPLRTIGLLGGTFDPIHYGHLRPAEEVREAVQLSELRLIPARIPPHRARPRVGPEQRAELVRRAVADNPSACVDEREL HRDGPSYTVDTLAELRAELGGVSLCLILGYDTFLGLPGWSRWRQLFERAHVVVTERPGVRGALPEALATEVARRVAHEPA ELRHRPAGCILFQAVTPVDISATGIRRSLALGRSVRYLLPEAVRQRVVEAGWYGYPQL
Sequences:
>Translated_218_residues MRQPLRTIGLLGGTFDPIHYGHLRPAEEVREAVQLSELRLIPARIPPHRARPRVGPEQRAELVRRAVADNPSACVDEREL HRDGPSYTVDTLAELRAELGGVSLCLILGYDTFLGLPGWSRWRQLFERAHVVVTERPGVRGALPEALATEVARRVAHEPA ELRHRPAGCILFQAVTPVDISATGIRRSLALGRSVRYLLPEAVRQRVVEAGWYGYPQL >Mature_218_residues MRQPLRTIGLLGGTFDPIHYGHLRPAEEVREAVQLSELRLIPARIPPHRARPRVGPEQRAELVRRAVADNPSACVDEREL HRDGPSYTVDTLAELRAELGGVSLCLILGYDTFLGLPGWSRWRQLFERAHVVVTERPGVRGALPEALATEVARRVAHEPA ELRHRPAGCILFQAVTPVDISATGIRRSLALGRSVRYLLPEAVRQRVVEAGWYGYPQL
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family
Homologues:
Organism=Escherichia coli, GI1786858, Length=207, Percent_Identity=39.1304347826087, Blast_Score=156, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADD_HALHL (A1WYZ3)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003707.1 - ProteinModelPortal: A1WYZ3 - SMR: A1WYZ3 - STRING: A1WYZ3 - GeneID: 4711338 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_2141 - eggNOG: COG1057 - HOGENOM: HBG739448 - OMA: LLGWDAF - PhylomeDB: A1WYZ3 - ProtClustDB: CLSK727108 - BioCyc: HHAL349124:HHAL_2141-MONOMER - HAMAP: MF_00244 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR12039 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00482
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.18
Molecular weight: Translated: 24331; Mature: 24331
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPLRTIGLLGGTFDPIHYGHLRPAEEVREAVQLSELRLIPARIPPHRARPRVGPEQRA CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH ELVRRAVADNPSACVDERELHRDGPSYTVDTLAELRAELGGVSLCLILGYDTFLGLPGWS HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCCCHH RWRQLFERAHVVVTERPGVRGALPEALATEVARRVAHEPAELRHRPAGCILFQAVTPVDI HHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCC SATGIRRSLALGRSVRYLLPEAVRQRVVEAGWYGYPQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRQPLRTIGLLGGTFDPIHYGHLRPAEEVREAVQLSELRLIPARIPPHRARPRVGPEQRA CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH ELVRRAVADNPSACVDERELHRDGPSYTVDTLAELRAELGGVSLCLILGYDTFLGLPGWS HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCCCHH RWRQLFERAHVVVTERPGVRGALPEALATEVARRVAHEPAELRHRPAGCILFQAVTPVDI HHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCC SATGIRRSLALGRSVRYLLPEAVRQRVVEAGWYGYPQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA