| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998895
Identifier: 121998895
GI number: 121998895
Start: 2320762
End: 2321076
Strand: Reverse
Name: 121998895
Synonym: Hhal_2116
Alternate gene names: NA
Gene position: 2321076-2320762 (Counterclockwise)
Preceding gene: 121998896
Following gene: 121998894
Centisome position: 86.66
GC content: 72.06
Gene sequence:
>315_bases ATGACCCGCGCGGCCCTCGAGAACGGGGTCGACGGGCGCTGGCGAGTCACCGGGCGGCTGGAGCTCGACACCGTGGGTGC CTTGTGGCCGCAGGGCACGGCGCTGTTCACCGCCGAAGGCGGGGTCTGCGAAATCGACCTGGCCGGTGTCGAGCGGACCG ACAGCGCCGGTGTGGCCCTCCTGATCGATTGGACGCGGCAGGCCCGGGCCCACGGCGGGCGGCTGTGCCTCTGCCACGTC CCGCAGCAGTTGCTGGCCATCGTGCATGCCAGTGGTGCGGAGGGGGTGCTTGAAATCGCCGACGAGCCGGCCTGA
Upstream 100 bases:
>100_bases TCCACAACTACCGCGAAGATTTCCGCTCGCGCTTGCGGGGCAAGGACCTCAAGACCGTGATCGACGAGATGGCAGAGCGC AACCGGGAGATCGGCTTCGA
Downstream 100 bases:
>100_bases ATCGGCTATAATCGTCCGCCCTCGCGGGGAGCCCGCGGTCCGTGTCCGGAGGGGATCGCCCCATGATGCAGCCACAAGAG ATTGAACGCCTGGTCCAGGA
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHGGRLCLCHV PQQLLAIVHASGAEGVLEIADEPA
Sequences:
>Translated_104_residues MTRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHGGRLCLCHV PQQLLAIVHASGAEGVLEIADEPA >Mature_103_residues TRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHGGRLCLCHVP QQLLAIVHASGAEGVLEIADEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10973; Mature: 10841
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVAL CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEE LIDWTRQARAHGGRLCLCHVPQQLLAIVHASGAEGVLEIADEPA EEECCHHHHCCCCEEEEEECCHHHHHHHCCCCCCCEEEECCCCC >Mature Secondary Structure TRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVAL CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEE LIDWTRQARAHGGRLCLCHVPQQLLAIVHASGAEGVLEIADEPA EEECCHHHHCCCCEEEEEECCHHHHHHHCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA