Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998895

Identifier: 121998895

GI number: 121998895

Start: 2320762

End: 2321076

Strand: Reverse

Name: 121998895

Synonym: Hhal_2116

Alternate gene names: NA

Gene position: 2321076-2320762 (Counterclockwise)

Preceding gene: 121998896

Following gene: 121998894

Centisome position: 86.66

GC content: 72.06

Gene sequence:

>315_bases
ATGACCCGCGCGGCCCTCGAGAACGGGGTCGACGGGCGCTGGCGAGTCACCGGGCGGCTGGAGCTCGACACCGTGGGTGC
CTTGTGGCCGCAGGGCACGGCGCTGTTCACCGCCGAAGGCGGGGTCTGCGAAATCGACCTGGCCGGTGTCGAGCGGACCG
ACAGCGCCGGTGTGGCCCTCCTGATCGATTGGACGCGGCAGGCCCGGGCCCACGGCGGGCGGCTGTGCCTCTGCCACGTC
CCGCAGCAGTTGCTGGCCATCGTGCATGCCAGTGGTGCGGAGGGGGTGCTTGAAATCGCCGACGAGCCGGCCTGA

Upstream 100 bases:

>100_bases
TCCACAACTACCGCGAAGATTTCCGCTCGCGCTTGCGGGGCAAGGACCTCAAGACCGTGATCGACGAGATGGCAGAGCGC
AACCGGGAGATCGGCTTCGA

Downstream 100 bases:

>100_bases
ATCGGCTATAATCGTCCGCCCTCGCGGGGAGCCCGCGGTCCGTGTCCGGAGGGGATCGCCCCATGATGCAGCCACAAGAG
ATTGAACGCCTGGTCCAGGA

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHGGRLCLCHV
PQQLLAIVHASGAEGVLEIADEPA

Sequences:

>Translated_104_residues
MTRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHGGRLCLCHV
PQQLLAIVHASGAEGVLEIADEPA
>Mature_103_residues
TRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHGGRLCLCHVP
QQLLAIVHASGAEGVLEIADEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10973; Mature: 10841

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVAL
CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEE
LIDWTRQARAHGGRLCLCHVPQQLLAIVHASGAEGVLEIADEPA
EEECCHHHHCCCCEEEEEECCHHHHHHHCCCCCCCEEEECCCCC
>Mature Secondary Structure 
TRAALENGVDGRWRVTGRLELDTVGALWPQGTALFTAEGGVCEIDLAGVERTDSAGVAL
CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEE
LIDWTRQARAHGGRLCLCHVPQQLLAIVHASGAEGVLEIADEPA
EEECCHHHHCCCCEEEEEECCHHHHHHHCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA