Click here to switch to the map view.

The map label for this gene is yrbA [C]

Identifier: 121998894

GI number: 121998894

Start: 2320448

End: 2320699

Strand: Reverse

Name: yrbA [C]

Synonym: Hhal_2115

Alternate gene names: 121998894

Gene position: 2320699-2320448 (Counterclockwise)

Preceding gene: 121998895

Following gene: 121998893

Centisome position: 86.64

GC content: 65.08

Gene sequence:

>252_bases
ATGATGCAGCCACAAGAGATTGAACGCCTGGTCCAGGATCAGCTCAGCGACGCCCGGGTGGAGGTGAGCGGGGACGGCCG
CCACTTCCGTGCCTTTATCGTCAGCCCCGACTTCCAGGGGCTGTCGCGTATCGAGCGCCACCGCCTGGTCAATCGGGCCC
TGCGCGCCCACATTGATGACGACACCCTACACGCCATCTCCATGCGGACCCTGACGCCTCCGGAGCACGAGCAACAGCAG
AAGGCGGGGTAG

Upstream 100 bases:

>100_bases
CGGAGGGGGTGCTTGAAATCGCCGACGAGCCGGCCTGAATCGGCTATAATCGTCCGCCCTCGCGGGGAGCCCGCGGTCCG
TGTCCGGAGGGGATCGCCCC

Downstream 100 bases:

>100_bases
GCCGATGGAGCGACTGCTCATCCGGGGCGGTAACCCCCTGCGTGGCGATATCCGTATCTCCGGGGCCAAGAATGCGGCCC
TGCCGGTCATGGCGGCGACC

Product: BolA family protein

Products: NA

Alternate protein names: BolA/YrbA Family Protein; BolA-Like Protein

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MMQPQEIERLVQDQLSDARVEVSGDGRHFRAFIVSPDFQGLSRIERHRLVNRALRAHIDDDTLHAISMRTLTPPEHEQQQ
KAG

Sequences:

>Translated_83_residues
MMQPQEIERLVQDQLSDARVEVSGDGRHFRAFIVSPDFQGLSRIERHRLVNRALRAHIDDDTLHAISMRTLTPPEHEQQQ
KAG
>Mature_83_residues
MMQPQEIERLVQDQLSDARVEVSGDGRHFRAFIVSPDFQGLSRIERHRLVNRALRAHIDDDTLHAISMRTLTPPEHEQQQ
KAG

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082226, Length=80, Percent_Identity=36.25, Blast_Score=62, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9584; Mature: 9584

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQPQEIERLVQDQLSDARVEVSGDGRHFRAFIVSPDFQGLSRIERHRLVNRALRAHIDD
CCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
DTLHAISMRTLTPPEHEQQQKAG
CCCHHEEECCCCCCCCCHHCCCC
>Mature Secondary Structure
MMQPQEIERLVQDQLSDARVEVSGDGRHFRAFIVSPDFQGLSRIERHRLVNRALRAHIDD
CCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
DTLHAISMRTLTPPEHEQQQKAG
CCCHHEEECCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA