| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is ttg2D [H]
Identifier: 121998896
GI number: 121998896
Start: 2321073
End: 2321693
Strand: Reverse
Name: ttg2D [H]
Synonym: Hhal_2117
Alternate gene names: 121998896
Gene position: 2321693-2321073 (Counterclockwise)
Preceding gene: 121998897
Following gene: 121998895
Centisome position: 86.68
GC content: 64.9
Gene sequence:
>621_bases ATGTTCAAGGTGAATCGCTGGACTCGTTCACTGGCCGTGTCGATGGCCCTGTTGCTGGCGCTGGCCTTCGGTCAGGCAGT GGCCAAGCCGGATCCGCGCCAAGTTGTGCAGGAGGTTACCGACGAGGTCATGCGGGTGCTTGAGGAGCACGGCGAGGAGA TCGCCGGCGATCCGGTGGCGCTCTACGACAAGCTGGCACCGGTGGTCGAGCCGCACATCGATTACGATCGGATCGGGGCG CGGATCCTCGGTCCCCACTGGCGCGACGCCGACGGGGAGACCCGCGACCGCTTCGTGACCGAGTTCCAGCGCAGCCTGCT GCGTACCTACGCGTCGAGCATGGAGGATTACGAGGGATTCGATGTCCGCATCCTCGGTAGCCGGCAGCGCGATGGCGGGG TCCAGGTCGGTATGGAAGTGGGTTCCGGTGACAGTCGGGCGCGGATCCTGTACCGCCTGGAGGAGAGCGATGACGCCTGG AAGCTGGTGGACGTCACCGCCGAGGGGGTCAGCCTGATCCACAACTACCGCGAAGATTTCCGCTCGCGCTTGCGGGGCAA GGACCTCAAGACCGTGATCGACGAGATGGCAGAGCGCAACCGGGAGATCGGCTTCGAATGA
Upstream 100 bases:
>100_bases TCACCGAGACCCAGTCGGCGGTGGTCCTGGAGCGGATCATCGGGCAGTTCGTCACCAGCATGCAGGATTGAGCTCGCCAC GCGCGACGGAGGCAGTAGAG
Downstream 100 bases:
>100_bases CCCGCGCGGCCCTCGAGAACGGGGTCGACGGGCGCTGGCGAGTCACCGGGCGGCTGGAGCTCGACACCGTGGGTGCCTTG TGGCCGCAGGGCACGGCGCT
Product: toluene tolerance family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFKVNRWTRSLAVSMALLLALAFGQAVAKPDPRQVVQEVTDEVMRVLEEHGEEIAGDPVALYDKLAPVVEPHIDYDRIGA RILGPHWRDADGETRDRFVTEFQRSLLRTYASSMEDYEGFDVRILGSRQRDGGVQVGMEVGSGDSRARILYRLEESDDAW KLVDVTAEGVSLIHNYREDFRSRLRGKDLKTVIDEMAERNREIGFE
Sequences:
>Translated_206_residues MFKVNRWTRSLAVSMALLLALAFGQAVAKPDPRQVVQEVTDEVMRVLEEHGEEIAGDPVALYDKLAPVVEPHIDYDRIGA RILGPHWRDADGETRDRFVTEFQRSLLRTYASSMEDYEGFDVRILGSRQRDGGVQVGMEVGSGDSRARILYRLEESDDAW KLVDVTAEGVSLIHNYREDFRSRLRGKDLKTVIDEMAERNREIGFE >Mature_206_residues MFKVNRWTRSLAVSMALLLALAFGQAVAKPDPRQVVQEVTDEVMRVLEEHGEEIAGDPVALYDKLAPVVEPHIDYDRIGA RILGPHWRDADGETRDRFVTEFQRSLLRTYASSMEDYEGFDVRILGSRQRDGGVQVGMEVGSGDSRARILYRLEESDDAW KLVDVTAEGVSLIHNYREDFRSRLRGKDLKTVIDEMAERNREIGFE
Specific function: Plays a role in toluene resistance [H]
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23500; Mature: 23500
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKVNRWTRSLAVSMALLLALAFGQAVAKPDPRQVVQEVTDEVMRVLEEHGEEIAGDPVA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHH LYDKLAPVVEPHIDYDRIGARILGPHWRDADGETRDRFVTEFQRSLLRTYASSMEDYEGF HHHHHHHHHCCCCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DVRILGSRQRDGGVQVGMEVGSGDSRARILYRLEESDDAWKLVDVTAEGVSLIHNYREDF CEEEECCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHH RSRLRGKDLKTVIDEMAERNREIGFE HHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFKVNRWTRSLAVSMALLLALAFGQAVAKPDPRQVVQEVTDEVMRVLEEHGEEIAGDPVA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHH LYDKLAPVVEPHIDYDRIGARILGPHWRDADGETRDRFVTEFQRSLLRTYASSMEDYEGF HHHHHHHHHCCCCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DVRILGSRQRDGGVQVGMEVGSGDSRARILYRLEESDDAWKLVDVTAEGVSLIHNYREDF CEEEECCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHH RSRLRGKDLKTVIDEMAERNREIGFE HHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9658016 [H]