Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998854

Identifier: 121998854

GI number: 121998854

Start: 2280205

End: 2280783

Strand: Reverse

Name: 121998854

Synonym: Hhal_2075

Alternate gene names: NA

Gene position: 2280783-2280205 (Counterclockwise)

Preceding gene: 121998855

Following gene: 121998852

Centisome position: 85.15

GC content: 70.98

Gene sequence:

>579_bases
ATGAGGTGTCTTCGAGCCGCAGTAGCGGCCTGCGTGATGCTGGCGGCAACGGCGGGTGCCAGCAACGCCTCCGAGCCGGA
TCAGGTGGAGTACCGGACCGGCCTGGACGTGCTTGAGTTCTTTCTCAGCGCCTCTCAGCCGATGGACAACGAACGCGCCC
AGGCGCTGTTCGGCGCCGCCGTGGCCTCGAATATGCGGGTGCCACCGGAGCACCTCGGTGTCGCCTTCCACGACCGTCGC
ACCGGCGGTGCCCTCGATCCCCAGGAGGTGCGGGAGTTGATCGGCCCCGTCCGCCAGGACGGCGCGCGGCAGCTGATCCA
CAGTGTCTCGGCCCTGTTCGCCGGCTACATGCCCATGGCGCCGGACCAGCTGGAGTTGCTGCTCGACGCCGCCTTCGTAG
CCAGCCTGCGCCGGCCGCCGCCCCATATCGACGTCGAGTTCTATGATCGGCGCCACGGCCCGACGGGCCTCGGCGGGGGC
GTCTCCGGCCGCGTTCCGGACGATGGAGCGGGGGCCACCGAGCCGGGGCCAGGAGGGGGTCCAGGGGTCGGTGGCGGGCT
GGTCCCAGGATTGCGCTAG

Upstream 100 bases:

>100_bases
CAGCGCACGCCCCCGGGCGTCGCTGGCGGTTTGCGTTGGGATCTCGTACTCTGACTGAGTCAGTGGCCAGCGGCCGCCCG
GTCGTACGGAGGGGTTCCCG

Downstream 100 bases:

>100_bases
CCGTTGACCTCGTAGACGTCGAAGCGTACGGCCCGACCGGCGACCGACCGGCTCGGCGGCGGGCCGGCCACCGGGGCCGC
GCGCTGTGGCCGCTTGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRCLRAAVAACVMLAATAGASNASEPDQVEYRTGLDVLEFFLSASQPMDNERAQALFGAAVASNMRVPPEHLGVAFHDRR
TGGALDPQEVRELIGPVRQDGARQLIHSVSALFAGYMPMAPDQLELLLDAAFVASLRRPPPHIDVEFYDRRHGPTGLGGG
VSGRVPDDGAGATEPGPGGGPGVGGGLVPGLR

Sequences:

>Translated_192_residues
MRCLRAAVAACVMLAATAGASNASEPDQVEYRTGLDVLEFFLSASQPMDNERAQALFGAAVASNMRVPPEHLGVAFHDRR
TGGALDPQEVRELIGPVRQDGARQLIHSVSALFAGYMPMAPDQLELLLDAAFVASLRRPPPHIDVEFYDRRHGPTGLGGG
VSGRVPDDGAGATEPGPGGGPGVGGGLVPGLR
>Mature_192_residues
MRCLRAAVAACVMLAATAGASNASEPDQVEYRTGLDVLEFFLSASQPMDNERAQALFGAAVASNMRVPPEHLGVAFHDRR
TGGALDPQEVRELIGPVRQDGARQLIHSVSALFAGYMPMAPDQLELLLDAAFVASLRRPPPHIDVEFYDRRHGPTGLGGG
VSGRVPDDGAGATEPGPGGGPGVGGGLVPGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19975; Mature: 19975

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCLRAAVAACVMLAATAGASNASEPDQVEYRTGLDVLEFFLSASQPMDNERAQALFGAA
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VASNMRVPPEHLGVAFHDRRTGGALDPQEVRELIGPVRQDGARQLIHSVSALFAGYMPMA
HHCCCCCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDQLELLLDAAFVASLRRPPPHIDVEFYDRRHGPTGLGGGVSGRVPDDGAGATEPGPGGG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGVGGGLVPGLR
CCCCCCCCCCCC
>Mature Secondary Structure
MRCLRAAVAACVMLAATAGASNASEPDQVEYRTGLDVLEFFLSASQPMDNERAQALFGAA
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VASNMRVPPEHLGVAFHDRRTGGALDPQEVRELIGPVRQDGARQLIHSVSALFAGYMPMA
HHCCCCCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDQLELLLDAAFVASLRRPPPHIDVEFYDRRHGPTGLGGGVSGRVPDDGAGATEPGPGGG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGVGGGLVPGLR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA