Click here to switch to the map view.

The map label for this gene is yfdZ [C]

Identifier: 121998752

GI number: 121998752

Start: 2174385

End: 2175674

Strand: Reverse

Name: yfdZ [C]

Synonym: Hhal_1973

Alternate gene names: 121998752

Gene position: 2175674-2174385 (Counterclockwise)

Preceding gene: 121998757

Following gene: 121998750

Centisome position: 81.23

GC content: 66.59

Gene sequence:

>1290_bases
ATGACAACTTCAAGAGAGGGTGCGAGCCGGCCGCTCCGCCCGGGGCGGCCGACGCGCGATCGCAGTGCAGAGCAACGCGG
AGAGCTTGCCGTGGCCTATCCCGACGATATCGATCCCGACGACGAGCGCGAGCCGGTGTGGAGCCCCTCGATCCGGGCCC
TGCCCATTCCCGGCATCCGCAAGATGGTGAACATGGCGGCCGAGATGGACGACGTCATCCATCTGTCCATTGGCCAGCCG
GACTTCCCCATGCCGGAGCACGTTGTCGAGGCCCACATCCAGGCCCTGCGCGACGGCAAGACCGGCTACACCATGGATGC
CGGCCTGCCGCAGATGCTCGAGGCGGTGGCGGAGTACTACAGCCACCGCTACGACCGCCCGCTGGAGCCGGAGAACGTGC
TCATCACCACCGGCGCCACCGAGGCGATGTATCTGGCCATCGCGGCCACCGCGGCGCCTGGGCGGCAGTTCCTGATCCCG
GATCCGACCTTCCCGCTCTACGCCCCGCTGATCCGCATGAACGGCGCCGAGGTCAAGCCGATCCCCACCCGCGCAGAGCA
CGGTCACCAGATCGATCCCCAGGAGGTGATCGACAACATCGGCATGCGCACCTTCGGGATCATCCTCAACTCGCCGAGCA
ACCCCACCGGTACGGTCTACCCCCGGGAGACCATCGAGGCCATCGTCCAGGAGGCCGCCTACCGTGGGGTCTACGTCTTC
AGCGACGAGGTCTACGACCACCTGCTGCTCGACGAGATGGAGTATCCGAGTGTGCTGCGCTGCACCTCGGACCTGGACCA
CGTCATGGCGGTCTCCAGCCTGTCGAAGACCTTCAGTATGGCCGGTCTGCGCATCGGCTGGTTGATCTCCAGCCAGGGGG
CGATCAAGAAGCTCCAGCGCTTCCATATCTTCACCACCACGGTCGCCAACACGCCGGCGCAGTGGGCCGGGGTGGCCGCC
CTCAAGGGGGGGATGGCGTGCGTCGACGAGATGCTCGAGGCCTACCGTCAGCGGCGTGACCGCATCGTTGAGCTCGTTAG
CAAGACCCCGCACCTGACCAGCTACCGGCCGCAGGGGGCGTTCTACATCTTCCCGTCGCTGCCGCCGAACACCGACGCCA
CCAACCTGGCCACGCGCATGCTCAAGGAGACCGGCGTGTGTGTCGTCCCGGGCGACGCCTTCGGCGACAGCTGCCCGAAC
TCGTTGCGCATCAGCTACGCGGCCTCGATGGACGACATCGAGCGGGCCTTCGAGCGCATCATCCCGTGGATGGAGAAGCA
GGGCTTCTAG

Upstream 100 bases:

>100_bases
ATGGGTTCTGTCCAAGGTATCCGCTGGGCCGGGGAGGGACAAGGAGCCTGCCGCGTTGAGCCGGATTTTGGTCGCGGGCA
CTTGTAAGCGCAGTGGCAGG

Downstream 100 bases:

>100_bases
CCGCAAGCGATTCGGGGCCGTGTCGGGTAGCACGGCCCCGGGCCGAGGGTGATCCGGCTACATCAGGCCGACCTGGAGCT
TGGCGGCCTCGGACATCATC

Product: aminotransferase, class I and II

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTTSREGASRPLRPGRPTRDRSAEQRGELAVAYPDDIDPDDEREPVWSPSIRALPIPGIRKMVNMAAEMDDVIHLSIGQP
DFPMPEHVVEAHIQALRDGKTGYTMDAGLPQMLEAVAEYYSHRYDRPLEPENVLITTGATEAMYLAIAATAAPGRQFLIP
DPTFPLYAPLIRMNGAEVKPIPTRAEHGHQIDPQEVIDNIGMRTFGIILNSPSNPTGTVYPRETIEAIVQEAAYRGVYVF
SDEVYDHLLLDEMEYPSVLRCTSDLDHVMAVSSLSKTFSMAGLRIGWLISSQGAIKKLQRFHIFTTTVANTPAQWAGVAA
LKGGMACVDEMLEAYRQRRDRIVELVSKTPHLTSYRPQGAFYIFPSLPPNTDATNLATRMLKETGVCVVPGDAFGDSCPN
SLRISYAASMDDIERAFERIIPWMEKQGF

Sequences:

>Translated_429_residues
MTTSREGASRPLRPGRPTRDRSAEQRGELAVAYPDDIDPDDEREPVWSPSIRALPIPGIRKMVNMAAEMDDVIHLSIGQP
DFPMPEHVVEAHIQALRDGKTGYTMDAGLPQMLEAVAEYYSHRYDRPLEPENVLITTGATEAMYLAIAATAAPGRQFLIP
DPTFPLYAPLIRMNGAEVKPIPTRAEHGHQIDPQEVIDNIGMRTFGIILNSPSNPTGTVYPRETIEAIVQEAAYRGVYVF
SDEVYDHLLLDEMEYPSVLRCTSDLDHVMAVSSLSKTFSMAGLRIGWLISSQGAIKKLQRFHIFTTTVANTPAQWAGVAA
LKGGMACVDEMLEAYRQRRDRIVELVSKTPHLTSYRPQGAFYIFPSLPPNTDATNLATRMLKETGVCVVPGDAFGDSCPN
SLRISYAASMDDIERAFERIIPWMEKQGF
>Mature_428_residues
TTSREGASRPLRPGRPTRDRSAEQRGELAVAYPDDIDPDDEREPVWSPSIRALPIPGIRKMVNMAAEMDDVIHLSIGQPD
FPMPEHVVEAHIQALRDGKTGYTMDAGLPQMLEAVAEYYSHRYDRPLEPENVLITTGATEAMYLAIAATAAPGRQFLIPD
PTFPLYAPLIRMNGAEVKPIPTRAEHGHQIDPQEVIDNIGMRTFGIILNSPSNPTGTVYPRETIEAIVQEAAYRGVYVFS
DEVYDHLLLDEMEYPSVLRCTSDLDHVMAVSSLSKTFSMAGLRIGWLISSQGAIKKLQRFHIFTTTVANTPAQWAGVAAL
KGGMACVDEMLEAYRQRRDRIVELVSKTPHLTSYRPQGAFYIFPSLPPNTDATNLATRMLKETGVCVVPGDAFGDSCPNS
LRISYAASMDDIERAFERIIPWMEKQGF

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=369, Percent_Identity=25.7452574525745, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI169881279, Length=369, Percent_Identity=25.7452574525745, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4507369, Length=385, Percent_Identity=25.974025974026, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI56713254, Length=387, Percent_Identity=26.3565891472868, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI56713256, Length=387, Percent_Identity=26.3565891472868, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI169881281, Length=366, Percent_Identity=22.1311475409836, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4885351, Length=387, Percent_Identity=25.3229974160207, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI149944424, Length=231, Percent_Identity=25.1082251082251, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1788722, Length=365, Percent_Identity=28.4931506849315, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1788627, Length=381, Percent_Identity=28.6089238845144, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI1786816, Length=374, Percent_Identity=29.4117647058824, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1790797, Length=403, Percent_Identity=25.3101736972705, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787710, Length=317, Percent_Identity=24.2902208201893, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788332, Length=206, Percent_Identity=27.6699029126214, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787909, Length=361, Percent_Identity=21.0526315789474, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71994476, Length=405, Percent_Identity=22.962962962963, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71994472, Length=405, Percent_Identity=22.962962962963, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17567663, Length=372, Percent_Identity=26.0752688172043, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17567369, Length=266, Percent_Identity=25.5639097744361, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322401, Length=233, Percent_Identity=27.4678111587983, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320317, Length=336, Percent_Identity=25.8928571428571, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323118, Length=339, Percent_Identity=24.4837758112094, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28573069, Length=389, Percent_Identity=25.706940874036, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24646114, Length=389, Percent_Identity=25.706940874036, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28573067, Length=389, Percent_Identity=25.706940874036, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28573065, Length=389, Percent_Identity=25.706940874036, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI18859735, Length=379, Percent_Identity=24.0105540897098, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI45551451, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641770, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641760, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641768, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641766, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641764, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 47639; Mature: 47508

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSREGASRPLRPGRPTRDRSAEQRGELAVAYPDDIDPDDEREPVWSPSIRALPIPGIR
CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
KMVNMAAEMDDVIHLSIGQPDFPMPEHVVEAHIQALRDGKTGYTMDAGLPQMLEAVAEYY
HHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
SHRYDRPLEPENVLITTGATEAMYLAIAATAAPGRQFLIPDPTFPLYAPLIRMNGAEVKP
HHHCCCCCCCCCEEEECCCCHHEEEEEEEECCCCCEEECCCCCCHHHHHHHHCCCCCCCC
IPTRAEHGHQIDPQEVIDNIGMRTFGIILNSPSNPTGTVYPRETIEAIVQEAAYRGVYVF
CCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
SDEVYDHLLLDEMEYPSVLRCTSDLDHVMAVSSLSKTFSMAGLRIGWLISSQGAIKKLQR
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHH
FHIFTTTVANTPAQWAGVAALKGGMACVDEMLEAYRQRRDRIVELVSKTPHLTSYRPQGA
HHEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
FYIFPSLPPNTDATNLATRMLKETGVCVVPGDAFGDSCPNSLRISYAASMDDIERAFERI
EEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
IPWMEKQGF
HHHHHHCCC
>Mature Secondary Structure 
TTSREGASRPLRPGRPTRDRSAEQRGELAVAYPDDIDPDDEREPVWSPSIRALPIPGIR
CCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
KMVNMAAEMDDVIHLSIGQPDFPMPEHVVEAHIQALRDGKTGYTMDAGLPQMLEAVAEYY
HHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
SHRYDRPLEPENVLITTGATEAMYLAIAATAAPGRQFLIPDPTFPLYAPLIRMNGAEVKP
HHHCCCCCCCCCEEEECCCCHHEEEEEEEECCCCCEEECCCCCCHHHHHHHHCCCCCCCC
IPTRAEHGHQIDPQEVIDNIGMRTFGIILNSPSNPTGTVYPRETIEAIVQEAAYRGVYVF
CCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
SDEVYDHLLLDEMEYPSVLRCTSDLDHVMAVSSLSKTFSMAGLRIGWLISSQGAIKKLQR
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHH
FHIFTTTVANTPAQWAGVAALKGGMACVDEMLEAYRQRRDRIVELVSKTPHLTSYRPQGA
HHEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
FYIFPSLPPNTDATNLATRMLKETGVCVVPGDAFGDSCPNSLRISYAASMDDIERAFERI
EEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
IPWMEKQGF
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]