| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998750
Identifier: 121998750
GI number: 121998750
Start: 2172869
End: 2173630
Strand: Reverse
Name: 121998750
Synonym: Hhal_1971
Alternate gene names: NA
Gene position: 2173630-2172869 (Counterclockwise)
Preceding gene: 121998752
Following gene: 121998748
Centisome position: 81.15
GC content: 73.1
Gene sequence:
>762_bases ATGGCAGAGGAGTGGACAGGACAACAGGGCGGTCACGGAGACGATCCGGCGCTCGCCCGTGAGCTGAGTTCGGCGACGGT GGTCATCTTCCGCTCGGGCCTGACCGACACCCGCTCGGTGGTGCGTGCGCTGCATCGGCGGGGGGTCGACTACCGGGAGG TCGAGATGCCCATGGGCTCGGCACAGATGCGTGACCGGTTCCACCAGCTCCAGGAGATGACCGGTTGGCGGAGTCTGCCG CAGATCTTCGTCCACGGCGCTTTTGTCGGCGGCCCCGATGAGCTGCTCGAGCATCCGGTGATCGGCGATGAGGCCCCGGC CGCGGCGCGGGCCGAGCGGCCCGGGCGGGTGCTGGGCTACGCCGGGCTGGTCCCCTTCGTCCTCGGGCTGTTGTTGGCTG CCGTCGCCCCGGCGGCGCTGCACGAGCAGGCAGTGGCGGCCACCCTGGTCTACGGCGCCGCCATCCTTTCGTTCCTGGGC GGGGTGCACTGGGGGGTGGCGCTGCTGCGCGACCAGCGCCCCTGGTCGGTGATGGCCGGGGGCGTGTTGCCAGCGCTGGT CGGATGGCTGGGGGCGGGCCTCGGGGTCGGCGGGGCCCCCGCCGGCGGGGCGCTGTTGCTGGCCGCCGGCTTTGCCGCCT GGTACGGCTACGAGCGCCTCGCCGACCCGGGCACCGGTTTCCCGCCTTGGTACCGCCAGCTCCGGGGCCGGCTCACCGCC GTGGTCTGCGCGGTGCTCCTGCTGTTGGCCCTGATCGCCTGA
Upstream 100 bases:
>100_bases ACGATCATGCTAGCAAAAGTGGACTTTCAGAGTCCGCATGTCCGCGACGCTGGTTGGCCGGATCCCCTACACTGGTCCGC GAGCAACCGGAGGAGGCGGC
Downstream 100 bases:
>100_bases CCCCAGGGGCCGGGGCCCTCAGTCCCGGCCCAGCCACTGGATGCGGTAGAGATCCAGGCGACGGTCCTTGTAATTGCGGA CCGAGCCCTCGTTGCGGATC
Product: glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAEEWTGQQGGHGDDPALARELSSATVVIFRSGLTDTRSVVRALHRRGVDYREVEMPMGSAQMRDRFHQLQEMTGWRSLP QIFVHGAFVGGPDELLEHPVIGDEAPAAARAERPGRVLGYAGLVPFVLGLLLAAVAPAALHEQAVAATLVYGAAILSFLG GVHWGVALLRDQRPWSVMAGGVLPALVGWLGAGLGVGGAPAGGALLLAAGFAAWYGYERLADPGTGFPPWYRQLRGRLTA VVCAVLLLLALIA
Sequences:
>Translated_253_residues MAEEWTGQQGGHGDDPALARELSSATVVIFRSGLTDTRSVVRALHRRGVDYREVEMPMGSAQMRDRFHQLQEMTGWRSLP QIFVHGAFVGGPDELLEHPVIGDEAPAAARAERPGRVLGYAGLVPFVLGLLLAAVAPAALHEQAVAATLVYGAAILSFLG GVHWGVALLRDQRPWSVMAGGVLPALVGWLGAGLGVGGAPAGGALLLAAGFAAWYGYERLADPGTGFPPWYRQLRGRLTA VVCAVLLLLALIA >Mature_252_residues AEEWTGQQGGHGDDPALARELSSATVVIFRSGLTDTRSVVRALHRRGVDYREVEMPMGSAQMRDRFHQLQEMTGWRSLPQ IFVHGAFVGGPDELLEHPVIGDEAPAAARAERPGRVLGYAGLVPFVLGLLLAAVAPAALHEQAVAATLVYGAAILSFLGG VHWGVALLRDQRPWSVMAGGVLPALVGWLGAGLGVGGAPAGGALLLAAGFAAWYGYERLADPGTGFPPWYRQLRGRLTAV VCAVLLLLALIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26671; Mature: 26540
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEWTGQQGGHGDDPALARELSSATVVIFRSGLTDTRSVVRALHRRGVDYREVEMPMGS CCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCH AQMRDRFHQLQEMTGWRSLPQIFVHGAFVGGPDELLEHPVIGDEAPAAARAERPGRVLGY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCHHHH AGLVPFVLGLLLAAVAPAALHEQAVAATLVYGAAILSFLGGVHWGVALLRDQRPWSVMAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GVLPALVGWLGAGLGVGGAPAGGALLLAAGFAAWYGYERLADPGTGFPPWYRQLRGRLTA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VVCAVLLLLALIA HHHHHHHHHHHHC >Mature Secondary Structure AEEWTGQQGGHGDDPALARELSSATVVIFRSGLTDTRSVVRALHRRGVDYREVEMPMGS CCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCH AQMRDRFHQLQEMTGWRSLPQIFVHGAFVGGPDELLEHPVIGDEAPAAARAERPGRVLGY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCHHHH AGLVPFVLGLLLAAVAPAALHEQAVAATLVYGAAILSFLGGVHWGVALLRDQRPWSVMAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GVLPALVGWLGAGLGVGGAPAGGALLLAAGFAAWYGYERLADPGTGFPPWYRQLRGRLTA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VVCAVLLLLALIA HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA