Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998726

Identifier: 121998726

GI number: 121998726

Start: 2143899

End: 2145080

Strand: Reverse

Name: 121998726

Synonym: Hhal_1947

Alternate gene names: NA

Gene position: 2145080-2143899 (Counterclockwise)

Preceding gene: 121998728

Following gene: 121998725

Centisome position: 80.09

GC content: 67.94

Gene sequence:

>1182_bases
ATGAGAAGGACATCGACCGTGGCGGCTGTGGCGGGACTGTTTGCATGGGGCGGTGCGGCGTCGGCGGCACAGGCCGGCGA
GGTCAGCCTTTATGGGCAGGTCCACGCCGGCCTGCACCAGTTCGCCTACGAGGACTCTTCCGACGTCACCAAATTCACGG
ACCAGGGGCGGACGCGCTGGGGCGTTTCCGGGCAGCAGCCCCTGGACGACGAGTGGACGGCCATCGGCCAACTGGAGTGG
AGCGCCAGCCCGCACCTGGGGGACGACGATTTTAGTCGACGGATCAGCTACGTGGGAGTGGACAGCCCCTACGGTGAGCT
GGTCGTCGGCACGGTCCACGCCGCCTACAAGACCCTCGGCGGCGTGCGCTGGGATCCGCTGGTGGCCACCGAGCTGCAGC
AGCGGCGCACCGGCGGGATGTCCGGCGGCTCCTTCGGCCACAACGATTTCGTCAACCGCGCGGTGCAGTACGTCAGCCCG
GAGATGGCCGGGCTGCAGCTGCACGCCCAGATCGGGGTGGAGGACGACAACCAGGACCGGACGCTGTCGAGCCCCGATCC
GGGTGATGCGGATCAGGACCTGCAGCAGGGCGATGTCATCCTTGGTGCCAGCTACCTCGGCCTCCCTGACTGGCACTTCA
TCGCCGCGGTGATGCACCTCGACGAGCGGTTCACCGACGTGGATGACGTGGACGACGGCGATACCAACTGGAAGGTGGGG
GCCCGCTGGGCGCCGGATGCGTTCTCTCTGGCCTACCAGTACGAGTCGGTGGAGATCATCCGCGGGCCCGGGGGCGCCGG
CCGGATCGACAACCTAGTGGGGGATCCCTCAAACCGGGTGGACGGCGAGAGTACAACGGATGACGACCCAGCCTTCTACG
ACGGCCGCTTCACCGACGCGGTGGACCACCACGCGCTGATCGGGACCTACCAGCAGGGGCGCAACCAGTGGGTGCTCGCC
CTCGGTCACGCCGACGCCGATGGCGACGACGAGGACGTCAGCTCGATCACCGGCGCCGTGGTCCATCAGCCCCACGAGGA
TTTCCGGGTGTACGCCGGCGTGCAGTACCAGTCCTTCGACGATGCGATCGGTAGCGCCGGCGAGGATCCCGACGAGGCCG
CCGACGATCACCTGACCACCTACGCCATCGGCGCCCGGTACGACTTCGGGGCGACGTTCTGA

Upstream 100 bases:

>100_bases
CAGGCTGGCTGGTGCACAGGCGGGCTGGGGAGGCGGCGTGGGGCGCAGCCCGGGTCGGTCTCCCGCCCGCGATCCATCCA
GGCATGGGGAGGCAGGCAGC

Downstream 100 bases:

>100_bases
GGGGTGGCCGGTGGCCACCCCGACCATACGAGAAGGAGGAGCCCATCCATGCAGCAATCGTCGCGCAGGGCACTGCTCAG
CGGTGCCACCCTATTCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MRRTSTVAAVAGLFAWGGAASAAQAGEVSLYGQVHAGLHQFAYEDSSDVTKFTDQGRTRWGVSGQQPLDDEWTAIGQLEW
SASPHLGDDDFSRRISYVGVDSPYGELVVGTVHAAYKTLGGVRWDPLVATELQQRRTGGMSGGSFGHNDFVNRAVQYVSP
EMAGLQLHAQIGVEDDNQDRTLSSPDPGDADQDLQQGDVILGASYLGLPDWHFIAAVMHLDERFTDVDDVDDGDTNWKVG
ARWAPDAFSLAYQYESVEIIRGPGGAGRIDNLVGDPSNRVDGESTTDDDPAFYDGRFTDAVDHHALIGTYQQGRNQWVLA
LGHADADGDDEDVSSITGAVVHQPHEDFRVYAGVQYQSFDDAIGSAGEDPDEAADDHLTTYAIGARYDFGATF

Sequences:

>Translated_393_residues
MRRTSTVAAVAGLFAWGGAASAAQAGEVSLYGQVHAGLHQFAYEDSSDVTKFTDQGRTRWGVSGQQPLDDEWTAIGQLEW
SASPHLGDDDFSRRISYVGVDSPYGELVVGTVHAAYKTLGGVRWDPLVATELQQRRTGGMSGGSFGHNDFVNRAVQYVSP
EMAGLQLHAQIGVEDDNQDRTLSSPDPGDADQDLQQGDVILGASYLGLPDWHFIAAVMHLDERFTDVDDVDDGDTNWKVG
ARWAPDAFSLAYQYESVEIIRGPGGAGRIDNLVGDPSNRVDGESTTDDDPAFYDGRFTDAVDHHALIGTYQQGRNQWVLA
LGHADADGDDEDVSSITGAVVHQPHEDFRVYAGVQYQSFDDAIGSAGEDPDEAADDHLTTYAIGARYDFGATF
>Mature_393_residues
MRRTSTVAAVAGLFAWGGAASAAQAGEVSLYGQVHAGLHQFAYEDSSDVTKFTDQGRTRWGVSGQQPLDDEWTAIGQLEW
SASPHLGDDDFSRRISYVGVDSPYGELVVGTVHAAYKTLGGVRWDPLVATELQQRRTGGMSGGSFGHNDFVNRAVQYVSP
EMAGLQLHAQIGVEDDNQDRTLSSPDPGDADQDLQQGDVILGASYLGLPDWHFIAAVMHLDERFTDVDDVDDGDTNWKVG
ARWAPDAFSLAYQYESVEIIRGPGGAGRIDNLVGDPSNRVDGESTTDDDPAFYDGRFTDAVDHHALIGTYQQGRNQWVLA
LGHADADGDDEDVSSITGAVVHQPHEDFRVYAGVQYQSFDDAIGSAGEDPDEAADDHLTTYAIGARYDFGATF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42455; Mature: 42455

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTSTVAAVAGLFAWGGAASAAQAGEVSLYGQVHAGLHQFAYEDSSDVTKFTDQGRTRW
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCEEE
GVSGQQPLDDEWTAIGQLEWSASPHLGDDDFSRRISYVGVDSPYGELVVGTVHAAYKTLG
CCCCCCCCCCCHHEEEEEEECCCCCCCCHHHHCEEEEEECCCCCCCEEEHHHHHHHHHHC
GVRWDPLVATELQQRRTGGMSGGSFGHNDFVNRAVQYVSPEMAGLQLHAQIGVEDDNQDR
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
TLSSPDPGDADQDLQQGDVILGASYLGLPDWHFIAAVMHLDERFTDVDDVDDGDTNWKVG
CCCCCCCCCCHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEC
ARWAPDAFSLAYQYESVEIIRGPGGAGRIDNLVGDPSNRVDGESTTDDDPAFYDGRFTDA
CEECCCHHEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC
VDHHALIGTYQQGRNQWVLALGHADADGDDEDVSSITGAVVHQPHEDFRVYAGVQYQSFD
HHCHHHEEHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEECCEECCHH
DAIGSAGEDPDEAADDHLTTYAIGARYDFGATF
HHHCCCCCCHHHHHCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRRTSTVAAVAGLFAWGGAASAAQAGEVSLYGQVHAGLHQFAYEDSSDVTKFTDQGRTRW
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCEEE
GVSGQQPLDDEWTAIGQLEWSASPHLGDDDFSRRISYVGVDSPYGELVVGTVHAAYKTLG
CCCCCCCCCCCHHEEEEEEECCCCCCCCHHHHCEEEEEECCCCCCCEEEHHHHHHHHHHC
GVRWDPLVATELQQRRTGGMSGGSFGHNDFVNRAVQYVSPEMAGLQLHAQIGVEDDNQDR
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
TLSSPDPGDADQDLQQGDVILGASYLGLPDWHFIAAVMHLDERFTDVDDVDDGDTNWKVG
CCCCCCCCCCHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEC
ARWAPDAFSLAYQYESVEIIRGPGGAGRIDNLVGDPSNRVDGESTTDDDPAFYDGRFTDA
CEECCCHHEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC
VDHHALIGTYQQGRNQWVLALGHADADGDDEDVSSITGAVVHQPHEDFRVYAGVQYQSFD
HHCHHHEEHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEECCEECCHH
DAIGSAGEDPDEAADDHLTTYAIGARYDFGATF
HHHCCCCCCHHHHHCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA