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The map label for this gene is 121998725

Identifier: 121998725

GI number: 121998725

Start: 2143524

End: 2143850

Strand: Reverse

Name: 121998725

Synonym: Hhal_1946

Alternate gene names: NA

Gene position: 2143850-2143524 (Counterclockwise)

Preceding gene: 121998726

Following gene: 121998724

Centisome position: 80.04

GC content: 68.81

Gene sequence:

>327_bases
ATGCAGCAATCGTCGCGCAGGGCACTGCTCAGCGGTGCCACCCTATTCGGTCTGCTATTCGGCGGGGGGGCGGCCACGGC
CGGCGATGGCGGGATCTCCGAGGGGGAGATGATCGCCAACAGTTGCCTGGCCTGCCACGGCCCCGGCGGCCAGGGGGCGG
AGAGCATGCCGCCGCTGGCCGGCTGGGATGAAGAGGCCCTGGTGGAGGTGATGAGAGACTTTCGCGAAGGCCGGGGGGAT
CCCACGGTGATGGATCGGCACGCCACCGGCTACACCGATGAGCAGCTGCGCGCGGTCGCGGCCTACCTCGCAGCAATGGA
TCAATAG

Upstream 100 bases:

>100_bases
CCTGACCACCTACGCCATCGGCGCCCGGTACGACTTCGGGGCGACGTTCTGAGGGGTGGCCGGTGGCCACCCCGACCATA
CGAGAAGGAGGAGCCCATCC

Downstream 100 bases:

>100_bases
GGAAGGGCAGGCATGAGCAAGCGCCTCACGAGACGAGATTTCATGCGCCTCGCCGGTCTCGGAACCGCGGGGGCCGGGCT
GGGGCTGGCCGGTTGCGCTC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MQQSSRRALLSGATLFGLLFGGGAATAGDGGISEGEMIANSCLACHGPGGQGAESMPPLAGWDEEALVEVMRDFREGRGD
PTVMDRHATGYTDEQLRAVAAYLAAMDQ

Sequences:

>Translated_108_residues
MQQSSRRALLSGATLFGLLFGGGAATAGDGGISEGEMIANSCLACHGPGGQGAESMPPLAGWDEEALVEVMRDFREGRGD
PTVMDRHATGYTDEQLRAVAAYLAAMDQ
>Mature_108_residues
MQQSSRRALLSGATLFGLLFGGGAATAGDGGISEGEMIANSCLACHGPGGQGAESMPPLAGWDEEALVEVMRDFREGRGD
PTVMDRHATGYTDEQLRAVAAYLAAMDQ

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11205; Mature: 11205

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQSSRRALLSGATLFGLLFGGGAATAGDGGISEGEMIANSCLACHGPGGQGAESMPPLA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
GWDEEALVEVMRDFREGRGDPTVMDRHATGYTDEQLRAVAAYLAAMDQ
CCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQSSRRALLSGATLFGLLFGGGAATAGDGGISEGEMIANSCLACHGPGGQGAESMPPLA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
GWDEEALVEVMRDFREGRGDPTVMDRHATGYTDEQLRAVAAYLAAMDQ
CCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA