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The map label for this gene is fccB [H]

Identifier: 121998724

GI number: 121998724

Start: 2142204

End: 2143511

Strand: Reverse

Name: fccB [H]

Synonym: Hhal_1945

Alternate gene names: 121998724

Gene position: 2143511-2142204 (Counterclockwise)

Preceding gene: 121998725

Following gene: 121998723

Centisome position: 80.03

GC content: 69.65

Gene sequence:

>1308_bases
ATGAGCAAGCGCCTCACGAGACGAGATTTCATGCGCCTCGCCGGTCTCGGAACCGCGGGGGCCGGGCTGGGGCTGGCCGG
TTGCGCTCCCACCGGGCCGGACGCCAATGGCCGCATCGAGGGGCGCGTGGTGGTGGTCGGCGGCGGCTCCGGCGGGGCCA
CTACCGCGCGCTACCTCAAGCACCACGCGCCGGAGCTCGAGGTCACGCTGATCGAGCCGAACGAGAGCTACTACACCTGC
TACGGCGGCAACTGGTACCTGGGTGGGTTCCGCGAGCTCCGGACCCTCCGCCACGGCTACCACACGCTGCGCGACGACTA
CGGCATCGAGGTCATCCACGACCGCGCCCGGGATATCGATCTCGACGGCCACCGGGTGGTGACCGCCGAGAACGGCCGGA
TCAGCTACGATCGTCTGGTCGTGGCGCCGGGGATCGCCTTCGACTGGGATCGGGTCGAGGGGATGGACGGGGACGACACC
ATCGCCGTCCCCCACGCCTGGTGGGGCGGGGCGCAGTACTCCATCCTGCGCGGCCAGATTGAGGCCATGGAGGATGGGGG
CACGGTCGTGATCTGCCCGCCGGACGGGCCGTACCGTTGCCCGCCGGGGCCGTACGAGCGCATGAGCCTGATCGCCCACT
ATCTCAAGCAGCACAAGCCGCGGGCCAAGGTGCTGGCGCTGGATCCCAAGGACAGCTTCTCCAAACAGGGCCTGTTCGAG
GAGGCGTGGGAAGCGCTCTACGGTGACATGATCGAGTGGGTGCCGGCGAAGGAGGGGGGCAAGCCGGAGCGCATCGCGGT
GCGGGAGCGCAAGGTCTTCACCGATGGCGGCGACGCGGAGCACCGCGCCGACGTCCTCAACGTCATCCCGCCGCAAAAGG
CCGGTGCCATCGCCGAGCGGGCCGGGCTGACCGACGAGGGCGGCTGGTGCCCGGTGGATCAGCGCACCTTCCGCTCGACC
CGGCACGACGACGTCTACGTGGTGGGAGATGCGGCTGTTGCCGGTGATATGCCCAAGTCCGGTCACGCCGCCAATAACCA
GGCCAAGCTGGTGGCCGCGAGCATCGTTAGCGAACTGCGCGGACACGAAGTGCCCGGGTTCCCGATGGTCAACACCTGCT
ACAGCCTGGCGGCCCCGGACTGGGGCGTGACCGTGGCCGCGGTTTACGAGTACCGCGACGGTGAGATGCGCTCGGTGGAA
GGCGCCGGCGGGTTGAGCCCCGAGGGGGCCTCGCGGGAGTTCCGGGCCCGGGAGGCGGATTACGCCCCCGGCTGGTACGC
CTCGATCACCCGCGACATCTTCGGCTAA

Upstream 100 bases:

>100_bases
TCCCACGGTGATGGATCGGCACGCCACCGGCTACACCGATGAGCAGCTGCGCGCGGTCGCGGCCTACCTCGCAGCAATGG
ATCAATAGGGAAGGGCAGGC

Downstream 100 bases:

>100_bases
GGGAAGAGGAGGGCGTGATGCGCAGGGAGTCGACGAGCGCCCGCGCGCCGCGCATTCGGACGGCACGCCGTGCCGCCCGG
GTGCTGGTGTTCGGGGGATG

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSKRLTRRDFMRLAGLGTAGAGLGLAGCAPTGPDANGRIEGRVVVVGGGSGGATTARYLKHHAPELEVTLIEPNESYYTC
YGGNWYLGGFRELRTLRHGYHTLRDDYGIEVIHDRARDIDLDGHRVVTAENGRISYDRLVVAPGIAFDWDRVEGMDGDDT
IAVPHAWWGGAQYSILRGQIEAMEDGGTVVICPPDGPYRCPPGPYERMSLIAHYLKQHKPRAKVLALDPKDSFSKQGLFE
EAWEALYGDMIEWVPAKEGGKPERIAVRERKVFTDGGDAEHRADVLNVIPPQKAGAIAERAGLTDEGGWCPVDQRTFRST
RHDDVYVVGDAAVAGDMPKSGHAANNQAKLVAASIVSELRGHEVPGFPMVNTCYSLAAPDWGVTVAAVYEYRDGEMRSVE
GAGGLSPEGASREFRAREADYAPGWYASITRDIFG

Sequences:

>Translated_435_residues
MSKRLTRRDFMRLAGLGTAGAGLGLAGCAPTGPDANGRIEGRVVVVGGGSGGATTARYLKHHAPELEVTLIEPNESYYTC
YGGNWYLGGFRELRTLRHGYHTLRDDYGIEVIHDRARDIDLDGHRVVTAENGRISYDRLVVAPGIAFDWDRVEGMDGDDT
IAVPHAWWGGAQYSILRGQIEAMEDGGTVVICPPDGPYRCPPGPYERMSLIAHYLKQHKPRAKVLALDPKDSFSKQGLFE
EAWEALYGDMIEWVPAKEGGKPERIAVRERKVFTDGGDAEHRADVLNVIPPQKAGAIAERAGLTDEGGWCPVDQRTFRST
RHDDVYVVGDAAVAGDMPKSGHAANNQAKLVAASIVSELRGHEVPGFPMVNTCYSLAAPDWGVTVAAVYEYRDGEMRSVE
GAGGLSPEGASREFRAREADYAPGWYASITRDIFG
>Mature_434_residues
SKRLTRRDFMRLAGLGTAGAGLGLAGCAPTGPDANGRIEGRVVVVGGGSGGATTARYLKHHAPELEVTLIEPNESYYTCY
GGNWYLGGFRELRTLRHGYHTLRDDYGIEVIHDRARDIDLDGHRVVTAENGRISYDRLVVAPGIAFDWDRVEGMDGDDTI
AVPHAWWGGAQYSILRGQIEAMEDGGTVVICPPDGPYRCPPGPYERMSLIAHYLKQHKPRAKVLALDPKDSFSKQGLFEE
AWEALYGDMIEWVPAKEGGKPERIAVRERKVFTDGGDAEHRADVLNVIPPQKAGAIAERAGLTDEGGWCPVDQRTFRSTR
HDDVYVVGDAAVAGDMPKSGHAANNQAKLVAASIVSELRGHEVPGFPMVNTCYSLAAPDWGVTVAAVYEYRDGEMRSVEG
AGGLSPEGASREFRAREADYAPGWYASITRDIFG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=358, Percent_Identity=25.9776536312849, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 47360; Mature: 47228

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLTRRDFMRLAGLGTAGAGLGLAGCAPTGPDANGRIEGRVVVVGGGSGGATTARYLK
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHH
HHAPELEVTLIEPNESYYTCYGGNWYLGGFRELRTLRHGYHTLRDDYGIEVIHDRARDID
HCCCCEEEEEECCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
LDGHRVVTAENGRISYDRLVVAPGIAFDWDRVEGMDGDDTIAVPHAWWGGAQYSILRGQI
CCCCEEEEECCCEEEECEEEEECCCEECHHHHCCCCCCCEEECCCCCCCCCEEEEECCCC
EAMEDGGTVVICPPDGPYRCPPGPYERMSLIAHYLKQHKPRAKVLALDPKDSFSKQGLFE
EEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHH
EAWEALYGDMIEWVPAKEGGKPERIAVRERKVFTDGGDAEHRADVLNVIPPQKAGAIAER
HHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHCCCCCHHCHHHHH
AGLTDEGGWCPVDQRTFRSTRHDDVYVVGDAAVAGDMPKSGHAANNQAKLVAASIVSELR
CCCCCCCCCCCCCHHHHHCCCCCCEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
GHEVPGFPMVNTCYSLAAPDWGVTVAAVYEYRDGEMRSVEGAGGLSPEGASREFRAREAD
CCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHCCCC
YAPGWYASITRDIFG
CCCCHHHHHHHHHCC
>Mature Secondary Structure 
SKRLTRRDFMRLAGLGTAGAGLGLAGCAPTGPDANGRIEGRVVVVGGGSGGATTARYLK
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHH
HHAPELEVTLIEPNESYYTCYGGNWYLGGFRELRTLRHGYHTLRDDYGIEVIHDRARDID
HCCCCEEEEEECCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
LDGHRVVTAENGRISYDRLVVAPGIAFDWDRVEGMDGDDTIAVPHAWWGGAQYSILRGQI
CCCCEEEEECCCEEEECEEEEECCCEECHHHHCCCCCCCEEECCCCCCCCCEEEEECCCC
EAMEDGGTVVICPPDGPYRCPPGPYERMSLIAHYLKQHKPRAKVLALDPKDSFSKQGLFE
EEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHH
EAWEALYGDMIEWVPAKEGGKPERIAVRERKVFTDGGDAEHRADVLNVIPPQKAGAIAER
HHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHCCCCCHHCHHHHH
AGLTDEGGWCPVDQRTFRSTRHDDVYVVGDAAVAGDMPKSGHAANNQAKLVAASIVSELR
CCCCCCCCCCCCCHHHHHCCCCCCEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
GHEVPGFPMVNTCYSLAAPDWGVTVAAVYEYRDGEMRSVEGAGGLSPEGASREFRAREAD
CCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHCCCC
YAPGWYASITRDIFG
CCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]