Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998722

Identifier: 121998722

GI number: 121998722

Start: 2141088

End: 2141594

Strand: Reverse

Name: 121998722

Synonym: Hhal_1943

Alternate gene names: NA

Gene position: 2141594-2141088 (Counterclockwise)

Preceding gene: 121998723

Following gene: 121998717

Centisome position: 79.96

GC content: 64.89

Gene sequence:

>507_bases
ATGACAGCACGGAAGGGGGAGCGAGGCCGGCTTGGTGGTGTGGCCGCTGGCCTGCTGGCACTCAGTGGCGCGCTGGCCAG
CGCAGCGGCGGAGGATTTCCCGGAGCCTCAACTGGTGTTCCACATCGATATGCAGGAGCCGCAGCGCGTCAGCTCCACCA
TCTTCAACGCCAATAACGCTGCGAGCCACTACGAAGGGCAGTTGCTCGATCACGATGTGCGGATCGTCCTGCACGGGTTC
GGTCTGCGGTATGTGACCGAGGACCGGCTGGCGGACACCGCCTACGAGGTGGATGAGGCCGACGTGGCCGAGCGTGACGA
TCTACTCCAGCGGCTGCGCACGCTCTCCGATACCTACGACGTGCAGCTGGAGGTCTGTGCCAGCTCCATGGACGAGGCGG
GGCTGGAGCAGGAGGATCTGGCGGTGGATGCGGAGCTGATCGACTACGGGGCCACCCGCCTCGAAGAGCTCCAGCGCCGC
GGCTTCTCGTATATCAAGATCCAGTAG

Upstream 100 bases:

>100_bases
CCCGGGGGCGAGCTCTCCTTCCGGCTGACGCCGGAGGATCTGGCCGATCTGCTGGAGCAGGAGGCGCACTAGGGCGGTTC
GGGCCGCAGGAGGGATGACC

Downstream 100 bases:

>100_bases
CGCCCTTCCGCGGGGCCGACACGACGAGGGCGCCGGGCAAGCCGGTGCCCTCGTCGTGTCGGGTACGGCGGTCGGCTTTC
AGCTCAGTTCCATCTCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTARKGERGRLGGVAAGLLALSGALASAAAEDFPEPQLVFHIDMQEPQRVSSTIFNANNAASHYEGQLLDHDVRIVLHGF
GLRYVTEDRLADTAYEVDEADVAERDDLLQRLRTLSDTYDVQLEVCASSMDEAGLEQEDLAVDAELIDYGATRLEELQRR
GFSYIKIQ

Sequences:

>Translated_168_residues
MTARKGERGRLGGVAAGLLALSGALASAAAEDFPEPQLVFHIDMQEPQRVSSTIFNANNAASHYEGQLLDHDVRIVLHGF
GLRYVTEDRLADTAYEVDEADVAERDDLLQRLRTLSDTYDVQLEVCASSMDEAGLEQEDLAVDAELIDYGATRLEELQRR
GFSYIKIQ
>Mature_167_residues
TARKGERGRLGGVAAGLLALSGALASAAAEDFPEPQLVFHIDMQEPQRVSSTIFNANNAASHYEGQLLDHDVRIVLHGFG
LRYVTEDRLADTAYEVDEADVAERDDLLQRLRTLSDTYDVQLEVCASSMDEAGLEQEDLAVDAELIDYGATRLEELQRRG
FSYIKIQ

Specific function: Unknown

COG id: COG1416

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18574; Mature: 18443

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARKGERGRLGGVAAGLLALSGALASAAAEDFPEPQLVFHIDMQEPQRVSSTIFNANNA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCC
ASHYEGQLLDHDVRIVLHGFGLRYVTEDRLADTAYEVDEADVAERDDLLQRLRTLSDTYD
CCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
VQLEVCASSMDEAGLEQEDLAVDAELIDYGATRLEELQRRGFSYIKIQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
TARKGERGRLGGVAAGLLALSGALASAAAEDFPEPQLVFHIDMQEPQRVSSTIFNANNA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCC
ASHYEGQLLDHDVRIVLHGFGLRYVTEDRLADTAYEVDEADVAERDDLLQRLRTLSDTYD
CCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
VQLEVCASSMDEAGLEQEDLAVDAELIDYGATRLEELQRRGFSYIKIQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA