| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is putP [C]
Identifier: 121998678
GI number: 121998678
Start: 2088879
End: 2091170
Strand: Reverse
Name: putP [C]
Synonym: Hhal_1899
Alternate gene names: 121998678
Gene position: 2091170-2088879 (Counterclockwise)
Preceding gene: 121998685
Following gene: 121998677
Centisome position: 78.07
GC content: 65.27
Gene sequence:
>2292_bases ATGTCAGCTATGGCCATATGGCTGTTGGTGTTTGTAGGCCTGTACTGGGGCTACTGCATCTTCTGGGGTATCAAGGGATA CCTTTGGTCGCGCACAGCCAGCGACTACTTCGTGGCCGGGCGCTCCGTCAGTATGTGGGTCTTCATACTGGCGGCAACGG CCACATCGTTCTCAGGGTGGACGTTCGTAGGACACCCGGGCCTGATCTACGAGGACGGCCTGCAGTACGCCTACGCCTCG TTCTACTCCATCTGCATCCCGTTCACCGGCATGCTGTTCCTCAAGCGCCAATGGATGATTGGCAAGCGTTGGGGTTACGT CACGCCGGGCGAGATGTTCGCGGACTACTTCCGGACGGACTCGATCCGCATCCTGATCCTCATTGTGGCGCTGATCTTCG CAGTGCCGTACCTGGGGATTCAGCTGCGCGCCTCGGGCTTCCTGTTCCACGTGCTCACCGACGGCTGGATGGGCGTCGAG ATCGGCATGTGGCTGCTGTCCGCGGTGGTGCTGTTCTACGTGGCCTCGGGCGGTCTGCGCGCCGTGGCGTACGTGGACGC GGCGCAGGCTGTTTTGCTCATTGTGGGCATCTTCGTCATCGGCGTCGTGACGCTCTACTACATCGGCGGCTGGAACAACT TCACGCACGTGATTGCCGGCCTGGTCGAGTGGGAGACCGCCACCGGTGGTGCGGGTGAGGTCTCGCCGGGCATGGTGCCG GGGGATAGCGGTGCCAGTGGCTATGTCGCCATCCCGGGTGCCATCCAGTGGGTCGGTGCCGCGGCCAACGCCCAGGGCGG TGTCTGGACCGGCGTCATGAACATCACCTACATGCTGGCGCTGGGCGGCATCATGGCCTCCCCGTCGTTCACCATGTGGG CGTTCTCGAACCAGAACCCGCGTCCGTTTGCGCCGCAACAGACCTGGATGTCCCCGGTGGGCGTCGGTGCCCTGATGTTC ACCTTCCTGGCGATCCAGGCGATGGCCACCCACGGCCTGGGGGCCAACACCGAGTTCGCCAAGGACATCTTCTCCGACGA GCACGGTGAGCAGCTGGCCGAGTACCGGACGCTGTTCGAGGCCTCCGAGGAGCACCAAGGGCTGGTGGACGAGGTGCGCG AGCGCCTGGACGCCGGCGAGTCCCTGGACGGCATGGATCTCAGCCCGCTGGTACCCACCGCGGTCATGCAGCGCGGCATG ATCCAGGCCGAGCATCCGGAACTCAGTCGTCAGGAGGTCGAGCAGGTCATCGCGGCCGGTCTGGCGGCGCTGTCCATCGG TGAGGATCCGCGCAACATGGATCCGGACTGGCTGGCAGCTCTGCCGGGCGATCTCGAGCGGGCCTGGCTGGACCTGTCCC TGGATCGGGGCGGTGACAGCGAGCTTGTGCCCCAGCTGCTGAACATGCTGGAGGCGGCGGCGCCGTGGCTGGCGGCCCTG CTGGCGGTCTGTGCCCTGGCGGCCATGCAGTCCACCGGCGCGGCGTACATGTCCACCACCAGTGGCATGTTTACCCGTGA CCTGCTGCGTCGCTACATCATGCCCAGTGCCAGCAACCAGGCCCAGGTGGTGGCGGGCCGGGTCTTCGTCACCATCCTGG TGCTTGCGGCCCTGACCGTGGCGACGGTGACCACCGACGCCCTGGTGCTGCTCGGCGGTCTGGCCACCGCCATGGGTACG CAGATGTGGGTGCCGCTGGCCGCCATCTGCTTCTTCCCCTGGCTTACCCGTCCGGGTGTGGTCTGGGGGCTGGGCGTTGG CATCGTTGCCGTGCTGATGACCGAGAACATCGGCATCGACCTGCTGGCGGCGGCGGGCGTCGACGTGCCCTGGGGCCGTT GGCCGCTGACCATCCACTCTGCCGGGTGGGGCCTGGTGCTTAACGCCCTGGTGGCCGTGGTCGTCTCGGCGATGACGCAG AACAACAAGGAAGACTACGATCACCGCATGACGGTGCACGCCTTCCTTCGCGAGCATGCGTCACTGCCGGCCGAGAAGCG CCACCTGATCCCGATCGCCTTCACCATCGTCATCGGCTGGTGGATCTTCGCCTTCGGTCCGGGCGCCCTGCTGGGCAACT GGGTCTTCGGTGATCCGACCAACCCCGATACCTGGTGGTTCCTCGGCCTGCCGTCCATCGTGGTCTGGCAGCTGCTGTGG TGGGTGATCGGTATCTACATGATGTGGTTCACCTGCTACAAGTGTGAGATGAGCACCGTGCCCGAGAAGGAAATCGAGGT CCTCTTCGACGAGGATCAGGGCAAGGCCCGCTACGACGTGAGCCGTCCGTAA
Upstream 100 bases:
>100_bases GCGCTCTGGGGCGGGTGGCACGGTTTTCGCTAGAGACCGCCGACCCCTGCGGGGGGATTGCAACACCTCATAACTCAAGA AATGTGAGGGGGAGACACGA
Downstream 100 bases:
>100_bases CGGGTCGGTGGTCATCGACCACTGCAACCGGGTAGCGCAGGGGGTCGTTCCGGCCCCCTGCGCCCCTCCCTTCAAGCGGT TTCATTCGAGCGAGCGATAT
Product: Na+/solute symporter
Products: NA
Alternate protein names: Pantothenate Permease; Na+/Proline Symporter; SSS Sodium Solute Transporter Superfamily; Sodium/Pantothenate Symporter; Transporter SoluteSodium Symporter Family Protein; Na+/Pantothenate Symporter PanF
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MSAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGWTFVGHPGLIYEDGLQYAYAS FYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTDSIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVE IGMWLLSAVVLFYVASGGLRAVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNPRPFAPQQTWMSPVGVGALMF TFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFEASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGM IQAEHPELSRQEVEQVIAAGLAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTVATVTTDALVLLGGLATAMGT QMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGIDLLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQ NNKEDYDHRMTVHAFLREHASLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP
Sequences:
>Translated_763_residues MSAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGWTFVGHPGLIYEDGLQYAYAS FYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTDSIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVE IGMWLLSAVVLFYVASGGLRAVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNPRPFAPQQTWMSPVGVGALMF TFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFEASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGM IQAEHPELSRQEVEQVIAAGLAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTVATVTTDALVLLGGLATAMGT QMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGIDLLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQ NNKEDYDHRMTVHAFLREHASLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP >Mature_762_residues SAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGWTFVGHPGLIYEDGLQYAYASF YSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTDSIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVEI GMWLLSAVVLFYVASGGLRAVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVPG DSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNPRPFAPQQTWMSPVGVGALMFT FLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFEASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGMI QAEHPELSRQEVEQVIAAGLAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAALL AVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTVATVTTDALVLLGGLATAMGTQ MWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGIDLLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQN NKEDYDHRMTVHAFLREHASLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLWW VIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP
Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular L-Proline. This Protein Is Also Capable Of Using Lithium As The Transport Cation. [C]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83380; Mature: 83249
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCE TFVGHPGLIYEDGLQYAYASFYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTD EEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC SIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVEIGMWLLSAVVLFYVASGGLR CHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE AVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNP CCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC RPFAPQQTWMSPVGVGALMFTFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFE CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH ASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGMIQAEHPELSRQEVEQVIAAG CCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL HHHHCCCCCCCCCCCHHHHHCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTV HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATVTTDALVLLGGLATAMGTQMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE LLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQNNKEDYDHRMTVHAFLREHA EEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHH WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCE TFVGHPGLIYEDGLQYAYASFYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTD EEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC SIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVEIGMWLLSAVVLFYVASGGLR CHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE AVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNP CCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC RPFAPQQTWMSPVGVGALMFTFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFE CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH ASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGMIQAEHPELSRQEVEQVIAAG CCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL HHHHCCCCCCCCCCCHHHHHCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTV HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATVTTDALVLLGGLATAMGTQMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE LLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQNNKEDYDHRMTVHAFLREHA EEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHH WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA