Click here to switch to the map view.

The map label for this gene is 121998611

Identifier: 121998611

GI number: 121998611

Start: 2003753

End: 2004346

Strand: Reverse

Name: 121998611

Synonym: Hhal_1832

Alternate gene names: NA

Gene position: 2004346-2003753 (Counterclockwise)

Preceding gene: 121998613

Following gene: 121998610

Centisome position: 74.83

GC content: 64.14

Gene sequence:

>594_bases
GTGTGGATTCGGGGTGCCCTAGTGCTGCTGGTGGTTGTGGCTTTGGTGGGCTGCGGCCACTCGGTGGAGCGAATCGACCG
GGACGAGGAATACGACCTCTCCGGGCGTTGGAATGACCAGGATTCGCGCCTGGTTGCCGAAGAGATGATCGCCGACGCCC
TGGATCGCCCCTGGCTGCGGGATTTTCGCCGCGAGGAGGGGGCTCGGCCGACGGTCATCGTCGGCGACGTCCGCAACCTC
AGCCACGAGCACATCAACACCCGCACCTTCGTCAACGATATCCAGCGGGAGTTGATCAATTCCGGCCAGGTGGACTTCGT
CGCTGACGCCGATCAGCGCGAGCGGATCCGGGAGGAGCGCCGGGATCAGGATCTGCACGCCAGCGAGGAGACCCGCAAGG
CCATGGGAGAGGAGCTGGGCGCGGATTACATGCTGCTCGGTTCGGTGAACTCCATCATCGATCAGGAGGGTCGGCGCCAG
GTCCGTTACTACCAGGTCGACATGGAGCTGATCAGCCTGGCCGATAACCGCAAGGTCTGGATTGGCAACAAGGAGATCCG
CAAGCTCGTGCGCTCGGCCTCGGCACGGCCCTGA

Upstream 100 bases:

>100_bases
TCTGCACGGACGCCCCGCTGACGTCGACCCCCGGGCGCTACACAGCGCGTTATACTGACCCGGCAAGGTGTTTTCCCGGG
AAAGCGAGAGGGCTATGACG

Downstream 100 bases:

>100_bases
GCGGCGGGGCCGCGTGAGGTCTGGACTGCGTTGGTCCGGGCTGGCGGTGGCGCTGGCCATCGCGTTGGCCGGGTGCACGA
CGTACGGTGACCGAATGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Lipoprotein Lipid Attachment Site

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MWIRGALVLLVVVALVGCGHSVERIDRDEEYDLSGRWNDQDSRLVAEEMIADALDRPWLRDFRREEGARPTVIVGDVRNL
SHEHINTRTFVNDIQRELINSGQVDFVADADQRERIREERRDQDLHASEETRKAMGEELGADYMLLGSVNSIIDQEGRRQ
VRYYQVDMELISLADNRKVWIGNKEIRKLVRSASARP

Sequences:

>Translated_197_residues
MWIRGALVLLVVVALVGCGHSVERIDRDEEYDLSGRWNDQDSRLVAEEMIADALDRPWLRDFRREEGARPTVIVGDVRNL
SHEHINTRTFVNDIQRELINSGQVDFVADADQRERIREERRDQDLHASEETRKAMGEELGADYMLLGSVNSIIDQEGRRQ
VRYYQVDMELISLADNRKVWIGNKEIRKLVRSASARP
>Mature_197_residues
MWIRGALVLLVVVALVGCGHSVERIDRDEEYDLSGRWNDQDSRLVAEEMIADALDRPWLRDFRREEGARPTVIVGDVRNL
SHEHINTRTFVNDIQRELINSGQVDFVADADQRERIREERRDQDLHASEETRKAMGEELGADYMLLGSVNSIIDQEGRRQ
VRYYQVDMELISLADNRKVWIGNKEIRKLVRSASARP

Specific function: Unknown

COG id: COG3417

COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22829; Mature: 22829

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIRGALVLLVVVALVGCGHSVERIDRDEEYDLSGRWNDQDSRLVAEEMIADALDRPWLR
CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
DFRREEGARPTVIVGDVRNLSHEHINTRTFVNDIQRELINSGQVDFVADADQRERIREER
HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
RDQDLHASEETRKAMGEELGADYMLLGSVNSIIDQEGRRQVRYYQVDMELISLADNRKVW
HCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGNKEIRKLVRSASARP
ECCHHHHHHHHHCCCCC
>Mature Secondary Structure
MWIRGALVLLVVVALVGCGHSVERIDRDEEYDLSGRWNDQDSRLVAEEMIADALDRPWLR
CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
DFRREEGARPTVIVGDVRNLSHEHINTRTFVNDIQRELINSGQVDFVADADQRERIREER
HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
RDQDLHASEETRKAMGEELGADYMLLGSVNSIIDQEGRRQVRYYQVDMELISLADNRKVW
HCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGNKEIRKLVRSASARP
ECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA