Click here to switch to the map view.

The map label for this gene is 121998610

Identifier: 121998610

GI number: 121998610

Start: 2002414

End: 2003739

Strand: Reverse

Name: 121998610

Synonym: Hhal_1831

Alternate gene names: NA

Gene position: 2003739-2002414 (Counterclockwise)

Preceding gene: 121998611

Following gene: 121998609

Centisome position: 74.81

GC content: 69.53

Gene sequence:

>1326_bases
GTGAGGTCTGGACTGCGTTGGTCCGGGCTGGCGGTGGCGCTGGCCATCGCGTTGGCCGGGTGCACGACGTACGGTGACCG
AATGGGCCCGGTGGAGGCCGCGGTCGACGAGGGGGACCCGCGCCGGGCAGTGGAACTCCTCGATGAGCGCAGCGGCGGCT
CCGGGGACCGGGTGGTGGACCTGCTCAACCGGGGCGCGCTGCTGCGCATGGCCGGCGAGTTCGAGGCGAGCAATCGTGCC
CTGGAGGCGGCCTATGACGCCATTGCCGAGGTCGACCCGCTGAGTGTCTCCGAGAGCGTTGGAAGCCTGATGGTGGGCGA
GACGGTCTTTGCCTATGCCGGCGAGCCCCACGAACGGGTGCTGCTCCATCTGCTCATGGCCTTCAATTATCTGGATCTGG
GTGACCCCGACGCCGCCCGGGTGGAGGCCCTGCGGGTGGATCTGCGTCTGCAGCGCCTGGCTGCCGAGCAGGGCCGGTCC
GTCTACCGGCAGGACCCCTTCGCGCGGTATCTCAGCGGGCTGATCTTCGAGCGTCTCGGCGAGCCGGATCAGGCCCTGGT
GGCGTATCGCCAGGCCTACCAGGCGTACCGGGAGCAGGGCGGCCGCCTGGGCGTCGCCGTGCCCCAGGCGCTGCACCGGG
ATCTGCTGCGTCTGGCTGATGAACTGGGTCTCGACGACGACCGGGCCGAGTGGCAGGAGGCGTTCGGGAAGGACACCTGG
CCGGATCCGGCCGCGCATCGCGAGCAGGCCCATGTGGTGATCGTCGCCGGGGTCGGATTGGCGCCGCGTAAGGGCGAACA
AGGGTTCGCGGTGCAGGACCATCAGGGGCGCATCCACAGCGTGGCCCTGCCGTATTACGAGCCGCGGCAGCGGCCGGTTG
GGGGCATCCGGGTCAGCAGCGAGGCGGCCTCGGTCGTGGCAGAGCCGGTGCACGATATCGATGCGGTCGCCCGTATCCTG
CTCCAGGAGCAGCAGGCCGCGCTGGCTGCCCGGGCGCTGGGCCGGCTGTTGGTGCAGAAGGAGATGATCGATCAGGCCCG
GGAAGCCAGTCCGGTAGCCGGCCTGGCTATGAACATCTTTACCCTGGTCGCCGACCGCGCAGATACCCGGACCTGGGGGA
TGCTGCCGGCGCAGTACTACATGGCCCGGATCAGCCTGCCGCCCGGTGAGCACCGGCTCGAGCTGGTCTATCAGGGGCGC
TCCGGGCACGCCCTGACCCGGGTGGATCTGGGGCCTCTGGAGCTTGAGGCCGGGGAGTACCACTTTGTCTTTGATCGCTG
GGTTTCGGCGCATGCTGGCTCCGTAACTCGCAGGGAGGAGCCGTGA

Upstream 100 bases:

>100_bases
CTGATCAGCCTGGCCGATAACCGCAAGGTCTGGATTGGCAACAAGGAGATCCGCAAGCTCGTGCGCTCGGCCTCGGCACG
GCCCTGAGCGGCGGGGCCGC

Downstream 100 bases:

>100_bases
GAAGTCTGGCCCTGTTCCTGGCAGGGGTCCTCCTGGCGGTCGGCTGCGCCGGTGGCGGTTCGCGGCCAGCGGAACCGCCG
GGCTGGGTGGAAGGGGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Adenine DNA Methylase; Lipoprotein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MRSGLRWSGLAVALAIALAGCTTYGDRMGPVEAAVDEGDPRRAVELLDERSGGSGDRVVDLLNRGALLRMAGEFEASNRA
LEAAYDAIAEVDPLSVSESVGSLMVGETVFAYAGEPHERVLLHLLMAFNYLDLGDPDAARVEALRVDLRLQRLAAEQGRS
VYRQDPFARYLSGLIFERLGEPDQALVAYRQAYQAYREQGGRLGVAVPQALHRDLLRLADELGLDDDRAEWQEAFGKDTW
PDPAAHREQAHVVIVAGVGLAPRKGEQGFAVQDHQGRIHSVALPYYEPRQRPVGGIRVSSEAASVVAEPVHDIDAVARIL
LQEQQAALAARALGRLLVQKEMIDQAREASPVAGLAMNIFTLVADRADTRTWGMLPAQYYMARISLPPGEHRLELVYQGR
SGHALTRVDLGPLELEAGEYHFVFDRWVSAHAGSVTRREEP

Sequences:

>Translated_441_residues
MRSGLRWSGLAVALAIALAGCTTYGDRMGPVEAAVDEGDPRRAVELLDERSGGSGDRVVDLLNRGALLRMAGEFEASNRA
LEAAYDAIAEVDPLSVSESVGSLMVGETVFAYAGEPHERVLLHLLMAFNYLDLGDPDAARVEALRVDLRLQRLAAEQGRS
VYRQDPFARYLSGLIFERLGEPDQALVAYRQAYQAYREQGGRLGVAVPQALHRDLLRLADELGLDDDRAEWQEAFGKDTW
PDPAAHREQAHVVIVAGVGLAPRKGEQGFAVQDHQGRIHSVALPYYEPRQRPVGGIRVSSEAASVVAEPVHDIDAVARIL
LQEQQAALAARALGRLLVQKEMIDQAREASPVAGLAMNIFTLVADRADTRTWGMLPAQYYMARISLPPGEHRLELVYQGR
SGHALTRVDLGPLELEAGEYHFVFDRWVSAHAGSVTRREEP
>Mature_441_residues
MRSGLRWSGLAVALAIALAGCTTYGDRMGPVEAAVDEGDPRRAVELLDERSGGSGDRVVDLLNRGALLRMAGEFEASNRA
LEAAYDAIAEVDPLSVSESVGSLMVGETVFAYAGEPHERVLLHLLMAFNYLDLGDPDAARVEALRVDLRLQRLAAEQGRS
VYRQDPFARYLSGLIFERLGEPDQALVAYRQAYQAYREQGGRLGVAVPQALHRDLLRLADELGLDDDRAEWQEAFGKDTW
PDPAAHREQAHVVIVAGVGLAPRKGEQGFAVQDHQGRIHSVALPYYEPRQRPVGGIRVSSEAASVVAEPVHDIDAVARIL
LQEQQAALAARALGRLLVQKEMIDQAREASPVAGLAMNIFTLVADRADTRTWGMLPAQYYMARISLPPGEHRLELVYQGR
SGHALTRVDLGPLELEAGEYHFVFDRWVSAHAGSVTRREEP

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48349; Mature: 48349

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGLRWSGLAVALAIALAGCTTYGDRMGPVEAAVDEGDPRRAVELLDERSGGSGDRVVD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH
LLNRGALLRMAGEFEASNRALEAAYDAIAEVDPLSVSESVGSLMVGETVFAYAGEPHERV
HHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEECCCCHHHH
LLHLLMAFNYLDLGDPDAARVEALRVDLRLQRLAAEQGRSVYRQDPFARYLSGLIFERLG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHC
EPDQALVAYRQAYQAYREQGGRLGVAVPQALHRDLLRLADELGLDDDRAEWQEAFGKDTW
CCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
PDPAAHREQAHVVIVAGVGLAPRKGEQGFAVQDHQGRIHSVALPYYEPRQRPVGGIRVSS
CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEECH
EAASVVAEPVHDIDAVARILLQEQQAALAARALGRLLVQKEMIDQAREASPVAGLAMNIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLVADRADTRTWGMLPAQYYMARISLPPGEHRLELVYQGRSGHALTRVDLGPLELEAGEY
HHHHCCCCCCHHCCCHHHHHHHEECCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCE
HFVFDRWVSAHAGSVTRREEP
EEHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRSGLRWSGLAVALAIALAGCTTYGDRMGPVEAAVDEGDPRRAVELLDERSGGSGDRVVD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH
LLNRGALLRMAGEFEASNRALEAAYDAIAEVDPLSVSESVGSLMVGETVFAYAGEPHERV
HHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEECCCCHHHH
LLHLLMAFNYLDLGDPDAARVEALRVDLRLQRLAAEQGRSVYRQDPFARYLSGLIFERLG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHC
EPDQALVAYRQAYQAYREQGGRLGVAVPQALHRDLLRLADELGLDDDRAEWQEAFGKDTW
CCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
PDPAAHREQAHVVIVAGVGLAPRKGEQGFAVQDHQGRIHSVALPYYEPRQRPVGGIRVSS
CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEECH
EAASVVAEPVHDIDAVARILLQEQQAALAARALGRLLVQKEMIDQAREASPVAGLAMNIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLVADRADTRTWGMLPAQYYMARISLPPGEHRLELVYQGRSGHALTRVDLGPLELEAGEY
HHHHCCCCCCHHCCCHHHHHHHEECCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCE
HFVFDRWVSAHAGSVTRREEP
EEHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA