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The map label for this gene is 121998562

Identifier: 121998562

GI number: 121998562

Start: 1956984

End: 1958456

Strand: Reverse

Name: 121998562

Synonym: Hhal_1783

Alternate gene names: NA

Gene position: 1958456-1956984 (Counterclockwise)

Preceding gene: 121998563

Following gene: 121998561

Centisome position: 73.12

GC content: 67.01

Gene sequence:

>1473_bases
ATGTGGATTCGACGTCTGCTCGCCGTCCTTCTTGCCTACTTCCTCTCGGCGGTCCCGCTGGGTAGTGCCGAGACGCCTCC
GGACGCCGGCGAAGATGCCGCCGGCACTGCGCTGATGCTTGACGTCAAGGGGGCCATCGGTCCGGCCACCACCGACTACA
TCGTGCGCGGCCTGGCCGAGGCTCAGGAACGGGGCGCCGGTCTGGTCATCCTGCGCATGAACACGCCCGGTGGTCTCGAC
GATGCCATGCGGGACATCATCAGCGAGATCCTCGCCAGCGACGTCCCTGTGGCCACCTACGTCGCGCCCAGCGGTTCCCG
CGCGGCGAGTGCCGGGACCTATATCCTCTATGCCTCGCACGTGGCCGCCATGGCGCCGGCGACCAACCTCGGTGCGGCCA
CTCCGGTGCAGATCGGCGGGGGAGGCGGTGGGATCTTCCCCGGTGGCGATGACGAGGAGCAGGGAGGCGACGCCCTGGAG
GAGCTCCGGGAGCGGCTCGGCGGCGAGGAGGAAGACGTCGACGAGGAGGCGCGTGAGGAAGACGAGGCGGTCGAGCAGGA
AGAGCCGGCGGAAGAGCGGGCCGACCGCCCGGACGCGATGGAGCGCAAGATCATCGAGGATGCGGTCTCCTACATCAAGG
GGCTGGCCGAGCTGCGCGGGCGCAATGCCGAGTGGGCCGAGAGGGCAGTGCGCGAATCGATCAGCGCCTCGGCGAGCGAG
GCGGCGGAGCTGGGGGTGATCGACTTCGTCGCCGAGGACGTGGATGAGCTCCTGGCCAAGGCCGATGGCGTGGTGGTCAA
GCTCCCCGGGGGCGAGCGGGCCATCGAGAGCGCCGGACTGGAGGTGGATCTGGTCGAACCGGACTGGCGCAATCGGCTGC
TTTCGGTGATCACCAACCCGAACGTGGCCTACATCCTGATGCTGGTGGGCATCTACGGCATCATCTTCGAACTGATCAAT
CCCGGTTCCCTGGTGCCTGGTGTCCTCGGTGGCATCAGTCTGCTGCTGGCCCTGTACGCCTTCCAGGCGTTGCCGATCAC
CTACGCCGGCCTGGGGCTGATCGGGCTGGGGATCGCCTTCATGATCGCCGAGGCGTTCATGCCCAGTTTCGGGATCATGG
GCATTGGCGGTGCCGTCGCCTTCGTCCTCGGCTCGATCATGCTGTTCGACACCGATCTTGAGGCCTTCCAGGTCTCGCTT
GGGGTGATCGCCGGGTTTACCGTGGCCAGTCTGATCATCTTCATCGGCGTGGCGATGATGGCCGCCCGGGCCTGGCAACG
ACCCAAACTCGGCGGGGCTGATGAACTCATCGATGCCGAGGCCATCGCCGAGGAGAGTTTCGAGGGGGCTGGCCACGTGC
GTTACGCCGGCGAGCGCTGGAATGCCGTGGCGGTGAGCCCGGTGCGTAGCGGCGAGCGGGTGCGCGTGGTCAGTAAGGAA
GGACTGACACTGAAGGTGGAGCCCAATGACTGA

Upstream 100 bases:

>100_bases
GGTGCGAGACGAGATCCTCGCTGCGCTGAAGGCGCGTTAACCGGGCACGCGGCGGGGGCTTGTCGTCGGCCCTCGCCGTT
TTTTGGAGGTGTGCCTGACC

Downstream 100 bases:

>100_bases
GCCGGGGATGGATTCGGACACGATCTATCAGGAGGCCCTGAGCCGCGTGCACCAGGTACTGGAGCGGGCCCGGGCCACGG
ATCTGCCGGAGCCCACCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Bound Serine Protease; Nodulation Protein NfeD; NfeD Protein; Nodulation Efficiency Protein D; Nodulation Competitiveness Protein NfeD; Membrane Bound Peptidase; Transmembrane Protein; NfeD Family Protein; Membrane-Bound Serine Protease-Like Protein; Nodulation Efficiency Family Protein; Membrane-Bound Serine Protease ClpP Class; NfeD Nodulation Like Protein Membrane Protein; Nodulation Efficiency Protein Nfed; Serine Protease; Nodulation Protein; Membrane-Bound Protease; NfeD-Like Family; Protease/Transporter; Membrane-Bound ClpP-Class Protease; S49 Family Serine Protease; Short-Chain Alcohol Dehydrogenase; Membrane-Bound Serine Protease NfeD-Like Protein; NfeD-Like Membrane-Bound Serine Protease; Nfed Family Protein; Nodulation Protein Nfed; Membrane-Bound Serine Protease Protein

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MWIRRLLAVLLAYFLSAVPLGSAETPPDAGEDAAGTALMLDVKGAIGPATTDYIVRGLAEAQERGAGLVILRMNTPGGLD
DAMRDIISEILASDVPVATYVAPSGSRAASAGTYILYASHVAAMAPATNLGAATPVQIGGGGGGIFPGGDDEEQGGDALE
ELRERLGGEEEDVDEEAREEDEAVEQEEPAEERADRPDAMERKIIEDAVSYIKGLAELRGRNAEWAERAVRESISASASE
AAELGVIDFVAEDVDELLAKADGVVVKLPGGERAIESAGLEVDLVEPDWRNRLLSVITNPNVAYILMLVGIYGIIFELIN
PGSLVPGVLGGISLLLALYAFQALPITYAGLGLIGLGIAFMIAEAFMPSFGIMGIGGAVAFVLGSIMLFDTDLEAFQVSL
GVIAGFTVASLIIFIGVAMMAARAWQRPKLGGADELIDAEAIAEESFEGAGHVRYAGERWNAVAVSPVRSGERVRVVSKE
GLTLKVEPND

Sequences:

>Translated_490_residues
MWIRRLLAVLLAYFLSAVPLGSAETPPDAGEDAAGTALMLDVKGAIGPATTDYIVRGLAEAQERGAGLVILRMNTPGGLD
DAMRDIISEILASDVPVATYVAPSGSRAASAGTYILYASHVAAMAPATNLGAATPVQIGGGGGGIFPGGDDEEQGGDALE
ELRERLGGEEEDVDEEAREEDEAVEQEEPAEERADRPDAMERKIIEDAVSYIKGLAELRGRNAEWAERAVRESISASASE
AAELGVIDFVAEDVDELLAKADGVVVKLPGGERAIESAGLEVDLVEPDWRNRLLSVITNPNVAYILMLVGIYGIIFELIN
PGSLVPGVLGGISLLLALYAFQALPITYAGLGLIGLGIAFMIAEAFMPSFGIMGIGGAVAFVLGSIMLFDTDLEAFQVSL
GVIAGFTVASLIIFIGVAMMAARAWQRPKLGGADELIDAEAIAEESFEGAGHVRYAGERWNAVAVSPVRSGERVRVVSKE
GLTLKVEPND
>Mature_490_residues
MWIRRLLAVLLAYFLSAVPLGSAETPPDAGEDAAGTALMLDVKGAIGPATTDYIVRGLAEAQERGAGLVILRMNTPGGLD
DAMRDIISEILASDVPVATYVAPSGSRAASAGTYILYASHVAAMAPATNLGAATPVQIGGGGGGIFPGGDDEEQGGDALE
ELRERLGGEEEDVDEEAREEDEAVEQEEPAEERADRPDAMERKIIEDAVSYIKGLAELRGRNAEWAERAVRESISASASE
AAELGVIDFVAEDVDELLAKADGVVVKLPGGERAIESAGLEVDLVEPDWRNRLLSVITNPNVAYILMLVGIYGIIFELIN
PGSLVPGVLGGISLLLALYAFQALPITYAGLGLIGLGIAFMIAEAFMPSFGIMGIGGAVAFVLGSIMLFDTDLEAFQVSL
GVIAGFTVASLIIFIGVAMMAARAWQRPKLGGADELIDAEAIAEESFEGAGHVRYAGERWNAVAVSPVRSGERVRVVSKE
GLTLKVEPND

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51395; Mature: 51395

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIRRLLAVLLAYFLSAVPLGSAETPPDAGEDAAGTALMLDVKGAIGPATTDYIVRGLAE
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
AQERGAGLVILRMNTPGGLDDAMRDIISEILASDVPVATYVAPSGSRAASAGTYILYASH
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHH
VAAMAPATNLGAATPVQIGGGGGGIFPGGDDEEQGGDALEELRERLGGEEEDVDEEAREE
HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
DEAVEQEEPAEERADRPDAMERKIIEDAVSYIKGLAELRGRNAEWAERAVRESISASASE
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
AAELGVIDFVAEDVDELLAKADGVVVKLPGGERAIESAGLEVDLVEPDWRNRLLSVITNP
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCEEEEECCHHHHHHHHHHCCC
NVAYILMLVGIYGIIFELINPGSLVPGVLGGISLLLALYAFQALPITYAGLGLIGLGIAF
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MIAEAFMPSFGIMGIGGAVAFVLGSIMLFDTDLEAFQVSLGVIAGFTVASLIIFIGVAMM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAWQRPKLGGADELIDAEAIAEESFEGAGHVRYAGERWNAVAVSPVRSGERVRVVSKE
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCEEEEEECC
GLTLKVEPND
CCEEEECCCC
>Mature Secondary Structure
MWIRRLLAVLLAYFLSAVPLGSAETPPDAGEDAAGTALMLDVKGAIGPATTDYIVRGLAE
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
AQERGAGLVILRMNTPGGLDDAMRDIISEILASDVPVATYVAPSGSRAASAGTYILYASH
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHH
VAAMAPATNLGAATPVQIGGGGGGIFPGGDDEEQGGDALEELRERLGGEEEDVDEEAREE
HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
DEAVEQEEPAEERADRPDAMERKIIEDAVSYIKGLAELRGRNAEWAERAVRESISASASE
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
AAELGVIDFVAEDVDELLAKADGVVVKLPGGERAIESAGLEVDLVEPDWRNRLLSVITNP
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCEEEEECCHHHHHHHHHHCCC
NVAYILMLVGIYGIIFELINPGSLVPGVLGGISLLLALYAFQALPITYAGLGLIGLGIAF
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MIAEAFMPSFGIMGIGGAVAFVLGSIMLFDTDLEAFQVSLGVIAGFTVASLIIFIGVAMM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAWQRPKLGGADELIDAEAIAEESFEGAGHVRYAGERWNAVAVSPVRSGERVRVVSKE
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCEEEEEECC
GLTLKVEPND
CCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA