| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is mgtE [H]
Identifier: 121998501
GI number: 121998501
Start: 1888752
End: 1890140
Strand: Reverse
Name: mgtE [H]
Synonym: Hhal_1722
Alternate gene names: 121998501
Gene position: 1890140-1888752 (Counterclockwise)
Preceding gene: 121998502
Following gene: 121998500
Centisome position: 70.57
GC content: 64.15
Gene sequence:
>1389_bases GTGCAAATCGATTTAGCTGCCGCTCCGGCGGACCCAGGCGTCTACGATGAACGCAAACGCCGCTTGGTCGAGACCTTCAC CAAACTCTACCTGCGCGGATCCTGGCGCCCCCTGGAACGACTGATCCGCCGTCTGCACGCCGCCGATGCAGCCGCCGTGC TGGTCGAGCTGCCGGTGCCGCAGGTGGTGGATACGCTCCAGGCGGTGAGCGATCTGCGCCACGCTGCGCAGATCGTCAAC AAGATGCCGCTGGCGATACGGCACCAGATCGTTGAGGCGCTACCGCACAAGGACCTGGCCGAGTTGCTGGAAAACTTCCG GCCGGACGACCTGACCGACCTGATCCAGGCTCTGCCCGATGAGCAGCGCGACCATCCGCTGTCCGCCCTGGATGCGGAAA GTCGCAGCGAGCTCGATACCCTGCTGGCCCACGATCCGGGCAGCGCCGGCGGCATCATGACTACGGAGTTTTTCTCGTTG CCCGAGGCGTGCACGGTGCAGGAGGCGATCGAGGCCCTGCGCGGTTACGCCGACGCGGAGATGGTCTTCTACCTGTTCCT GACCGGAGAGGAGGGGCGGCTGACCGGCGTCATCTCGCTGCGTCAACTCCTGCTCGCGCCGAGCGATGCTCAAGTGGCAG ATGTGATGAGCGGCCGGGTGATCCGCGTACGCACCGACACCGAGGAGGAGCAGGTCTCCCGGCTCTTCGACAAGTATCGC CTACTGGCTTTGCCCGTGGTCGACGACAACGACGTGCTGGTCGGCATCATCACCGTTGACGACATCATCGATGTGATCGG CGAATCGACCACCGAGGACATGCTGCGCATGGCCGGTACTCGCCAGTCGGAGATGCTGACCGATTCGGTGTTCCGCATTG CCGGCGTGCGGCTGCCGTGGTTGTTCGCCGCCTTCCTCGGTGGGCTCGGTGCCACCGCAGTCATCGGGCAGTACGAGGAG GTGCTTGCCCAGGTTATCATCCTCAGTGCCTTCGTCCCGATTATCATCGGCATGGCGGGCAATGTCGGGGTGCAGTCGGC CACCGTGACGGTGCGCGGTTTGGCTACCGGGGCGATCAACCCCCGCGATACCTTGGTTATGGTCTTCAAGGAGCTACGGG TGGGTCTGCTGCTGGGCGCCTTCTACGGCGTGATCCTGGCTGCCTACGGCTTCTGGGTGTATGACAGCCTTCAACTCGGA CAGGTCGTCGGCCTCACCATCCTGACCAATATGACCGGTGCCGCGCTGCTGGCGGTCTCGCTGCCCATGCTATTCGTCCG GTTGAAGGCCGATCCCGCCGTGGCTACGGGCCCCTTCGTGACCACGGCGATCGACGTACTCGGGGTGCTGAACTACTTCG CCATCGCTTCCCTGATCTACGGCCTGTAG
Upstream 100 bases:
>100_bases GGGCGCAGGTCGAGCAAGGGCGCATCCTACGCATCGTGGCCATCTTCGACGCCTACGCCTACTGGTCGATGTTCGAGGAT TTGGAGCCCCAGGGGAAGCC
Downstream 100 bases:
>100_bases GGGCGGCCGCGCCGGTATGACGCGGGTACTAGCTTTGGGCCCCCGCGCCGTAGGAGACTAAGGGATCATGCTCAGGCTCC AAGATGAGCGCCGTTCGGGT
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MQIDLAAAPADPGVYDERKRRLVETFTKLYLRGSWRPLERLIRRLHAADAAAVLVELPVPQVVDTLQAVSDLRHAAQIVN KMPLAIRHQIVEALPHKDLAELLENFRPDDLTDLIQALPDEQRDHPLSALDAESRSELDTLLAHDPGSAGGIMTTEFFSL PEACTVQEAIEALRGYADAEMVFYLFLTGEEGRLTGVISLRQLLLAPSDAQVADVMSGRVIRVRTDTEEEQVSRLFDKYR LLALPVVDDNDVLVGIITVDDIIDVIGESTTEDMLRMAGTRQSEMLTDSVFRIAGVRLPWLFAAFLGGLGATAVIGQYEE VLAQVIILSAFVPIIIGMAGNVGVQSATVTVRGLATGAINPRDTLVMVFKELRVGLLLGAFYGVILAAYGFWVYDSLQLG QVVGLTILTNMTGAALLAVSLPMLFVRLKADPAVATGPFVTTAIDVLGVLNYFAIASLIYGL
Sequences:
>Translated_462_residues MQIDLAAAPADPGVYDERKRRLVETFTKLYLRGSWRPLERLIRRLHAADAAAVLVELPVPQVVDTLQAVSDLRHAAQIVN KMPLAIRHQIVEALPHKDLAELLENFRPDDLTDLIQALPDEQRDHPLSALDAESRSELDTLLAHDPGSAGGIMTTEFFSL PEACTVQEAIEALRGYADAEMVFYLFLTGEEGRLTGVISLRQLLLAPSDAQVADVMSGRVIRVRTDTEEEQVSRLFDKYR LLALPVVDDNDVLVGIITVDDIIDVIGESTTEDMLRMAGTRQSEMLTDSVFRIAGVRLPWLFAAFLGGLGATAVIGQYEE VLAQVIILSAFVPIIIGMAGNVGVQSATVTVRGLATGAINPRDTLVMVFKELRVGLLLGAFYGVILAAYGFWVYDSLQLG QVVGLTILTNMTGAALLAVSLPMLFVRLKADPAVATGPFVTTAIDVLGVLNYFAIASLIYGL >Mature_462_residues MQIDLAAAPADPGVYDERKRRLVETFTKLYLRGSWRPLERLIRRLHAADAAAVLVELPVPQVVDTLQAVSDLRHAAQIVN KMPLAIRHQIVEALPHKDLAELLENFRPDDLTDLIQALPDEQRDHPLSALDAESRSELDTLLAHDPGSAGGIMTTEFFSL PEACTVQEAIEALRGYADAEMVFYLFLTGEEGRLTGVISLRQLLLAPSDAQVADVMSGRVIRVRTDTEEEQVSRLFDKYR LLALPVVDDNDVLVGIITVDDIIDVIGESTTEDMLRMAGTRQSEMLTDSVFRIAGVRLPWLFAAFLGGLGATAVIGQYEE VLAQVIILSAFVPIIIGMAGNVGVQSATVTVRGLATGAINPRDTLVMVFKELRVGLLLGAFYGVILAAYGFWVYDSLQLG QVVGLTILTNMTGAALLAVSLPMLFVRLKADPAVATGPFVTTAIDVLGVLNYFAIASLIYGL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 50192; Mature: 50192
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIDLAAAPADPGVYDERKRRLVETFTKLYLRGSWRPLERLIRRLHAADAAAVLVELPVP CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCH QVVDTLQAVSDLRHAAQIVNKMPLAIRHQIVEALPHKDLAELLENFRPDDLTDLIQALPD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCC EQRDHPLSALDAESRSELDTLLAHDPGSAGGIMTTEFFSLPEACTVQEAIEALRGYADAE CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCE MVFYLFLTGEEGRLTGVISLRQLLLAPSDAQVADVMSGRVIRVRTDTEEEQVSRLFDKYR EEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHH LLALPVVDDNDVLVGIITVDDIIDVIGESTTEDMLRMAGTRQSEMLTDSVFRIAGVRLPW EEEEEEECCCCEEEEEEEHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH LFAAFLGGLGATAVIGQYEEVLAQVIILSAFVPIIIGMAGNVGVQSATVTVRGLATGAIN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCC PRDTLVMVFKELRVGLLLGAFYGVILAAYGFWVYDSLQLGQVVGLTILTNMTGAALLAVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHH LPMLFVRLKADPAVATGPFVTTAIDVLGVLNYFAIASLIYGL HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQIDLAAAPADPGVYDERKRRLVETFTKLYLRGSWRPLERLIRRLHAADAAAVLVELPVP CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCH QVVDTLQAVSDLRHAAQIVNKMPLAIRHQIVEALPHKDLAELLENFRPDDLTDLIQALPD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCC EQRDHPLSALDAESRSELDTLLAHDPGSAGGIMTTEFFSLPEACTVQEAIEALRGYADAE CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCE MVFYLFLTGEEGRLTGVISLRQLLLAPSDAQVADVMSGRVIRVRTDTEEEQVSRLFDKYR EEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHH LLALPVVDDNDVLVGIITVDDIIDVIGESTTEDMLRMAGTRQSEMLTDSVFRIAGVRLPW EEEEEEECCCCEEEEEEEHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH LFAAFLGGLGATAVIGQYEEVLAQVIILSAFVPIIIGMAGNVGVQSATVTVRGLATGAIN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCC PRDTLVMVFKELRVGLLLGAFYGVILAAYGFWVYDSLQLGQVVGLTILTNMTGAALLAVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHH LPMLFVRLKADPAVATGPFVTTAIDVLGVLNYFAIASLIYGL HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]