Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is cdsA [H]

Identifier: 121998243

GI number: 121998243

Start: 1577582

End: 1578406

Strand: Reverse

Name: cdsA [H]

Synonym: Hhal_1461

Alternate gene names: 121998243

Gene position: 1578406-1577582 (Counterclockwise)

Preceding gene: 121998244

Following gene: 121998242

Centisome position: 58.93

GC content: 68.12

Gene sequence:

>825_bases
ATGCTTAAGGCACGGGTGCTGACCGCGCTGGCGCTGGGGCCGCTGCTTCTTGCCGCAATCTGGTTGTTGCCTACCCCGGT
GCTGGCGTTGGCGCTGGGGGGGGTCGCGGCCCTTGCGGCCTGGGAGTGGACCACACTGATCGGCGTACAGGATCACGGCC
GCCGGGTGGCCCTGGTCGGTGGCTTTGCCATGACGCTGCTGCCCGGGTGGTGGTTGCTGCAGGCCGTTCCGGCGGTTAGC
GGCATCCTCTACGCGGTGGCTGCCTTGTGGCTTGTGGCCCTGTGCTGGCTGGTGCTGTATACCCGGCGTGAGCTGGCTGC
CCCATCACCGCTGGTGTCCGCCGTGGTGGGTTGGCTAGTGCTCTGGCCCTGCTGGCTGGCCCTGGTGTATCTGCACGGTA
GTACCCCCTGGGGTCCCTTCTGGCACACCTTCCTGCTGGTCCTGGTCTGGGGCGCAGATACCGGTGCCTACTTCGCCGGG
CGGGCCTGGGGGCGTCGCCGGCTAGCCCCATGCATCAGCCCCGGCAAGAGCTGGGAGGGGGCTGTGGGAGGCGGTCTGGC
CGCGCTGCTGGGTGGCGGAGCATTGGTGCTCCTGCTTCAGCCTCAGGCCCCCGGCGTGGTGGCTCTTGCGCTGCTGACGG
TGGCGGTGATCGTCGCCTCAGTGGTGGGGGATCTCTTTGAAAGTATGCTCAAGCGTCAACGCGGCGTGAAGGACAGTGGC
GGAATCCTGCCGGGGCACGGCGGGATCCTTGACCGTATCGACAGTCTGACCGCGGCGGCGCCGGTTCTAGCAGCGGGGTT
AGCGTGGTGGCAGAGCGGAATGTGA

Upstream 100 bases:

>100_bases
GACTTCGGTACCGAGGGGTTGGCCCGCGCCATCGAAGACTATGCCGCGCGGGATCGTCGATTCGGTGCGGTCACCTCCTA
TCCGCTGAAGTCGGTGCGCC

Downstream 100 bases:

>100_bases
TGCGGCTGGCAGTACTCGGGGCCACGGGGTCCATTGGTACGAGCACCCTGGATGTGGCAATCAGGCACCCCGAACGTTTC
GAGGTTCGGGCCGTGGCTGC

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLKARVLTALALGPLLLAAIWLLPTPVLALALGGVAALAAWEWTTLIGVQDHGRRVALVGGFAMTLLPGWWLLQAVPAVS
GILYAVAALWLVALCWLVLYTRRELAAPSPLVSAVVGWLVLWPCWLALVYLHGSTPWGPFWHTFLLVLVWGADTGAYFAG
RAWGRRRLAPCISPGKSWEGAVGGGLAALLGGGALVLLLQPQAPGVVALALLTVAVIVASVVGDLFESMLKRQRGVKDSG
GILPGHGGILDRIDSLTAAAPVLAAGLAWWQSGM

Sequences:

>Translated_274_residues
MLKARVLTALALGPLLLAAIWLLPTPVLALALGGVAALAAWEWTTLIGVQDHGRRVALVGGFAMTLLPGWWLLQAVPAVS
GILYAVAALWLVALCWLVLYTRRELAAPSPLVSAVVGWLVLWPCWLALVYLHGSTPWGPFWHTFLLVLVWGADTGAYFAG
RAWGRRRLAPCISPGKSWEGAVGGGLAALLGGGALVLLLQPQAPGVVALALLTVAVIVASVVGDLFESMLKRQRGVKDSG
GILPGHGGILDRIDSLTAAAPVLAAGLAWWQSGM
>Mature_274_residues
MLKARVLTALALGPLLLAAIWLLPTPVLALALGGVAALAAWEWTTLIGVQDHGRRVALVGGFAMTLLPGWWLLQAVPAVS
GILYAVAALWLVALCWLVLYTRRELAAPSPLVSAVVGWLVLWPCWLALVYLHGSTPWGPFWHTFLLVLVWGADTGAYFAG
RAWGRRRLAPCISPGKSWEGAVGGGLAALLGGGALVLLLQPQAPGVVALALLTVAVIVASVVGDLFESMLKRQRGVKDSG
GILPGHGGILDRIDSLTAAAPVLAAGLAWWQSGM

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=278, Percent_Identity=39.9280575539568, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787677, Length=111, Percent_Identity=43.2432432432432, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 28716; Mature: 28716

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKARVLTALALGPLLLAAIWLLPTPVLALALGGVAALAAWEWTTLIGVQDHGRRVALVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEC
GFAMTLLPGWWLLQAVPAVSGILYAVAALWLVALCWLVLYTRRELAAPSPLVSAVVGWLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LWPCWLALVYLHGSTPWGPFWHTFLLVLVWGADTGAYFAGRAWGRRRLAPCISPGKSWEG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCCCCCCCCCCCC
AVGGGLAALLGGGALVLLLQPQAPGVVALALLTVAVIVASVVGDLFESMLKRQRGVKDSG
CCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GILPGHGGILDRIDSLTAAAPVLAAGLAWWQSGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKARVLTALALGPLLLAAIWLLPTPVLALALGGVAALAAWEWTTLIGVQDHGRRVALVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEC
GFAMTLLPGWWLLQAVPAVSGILYAVAALWLVALCWLVLYTRRELAAPSPLVSAVVGWLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LWPCWLALVYLHGSTPWGPFWHTFLLVLVWGADTGAYFAGRAWGRRRLAPCISPGKSWEG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCCCCCCCCCCCC
AVGGGLAALLGGGALVLLLQPQAPGVVALALLTVAVIVASVVGDLFESMLKRQRGVKDSG
CCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GILPGHGGILDRIDSLTAAAPVLAAGLAWWQSGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]