Click here to switch to the map view.

The map label for this gene is 121998222

Identifier: 121998222

GI number: 121998222

Start: 1551922

End: 1552368

Strand: Reverse

Name: 121998222

Synonym: Hhal_1440

Alternate gene names: NA

Gene position: 1552368-1551922 (Counterclockwise)

Preceding gene: 121998224

Following gene: 121998221

Centisome position: 57.96

GC content: 68.01

Gene sequence:

>447_bases
ATGGCAAGAAAAACCCCACGTGATCAGGCGCGGGCCGAGTTCGCAGAGCGGTTGCGGCAGGCCATCCACCGGTGTGGAAT
CGGTCCCCGGGAGTATGCCGAGCTGGGCCGCAGGGTCGGGGTCTCCAAGCAGGCCGCCCGCCTGTGGGTCGAGGGGCAGA
ACCTGCCGACCCGCGAGAACATCGCGAACCTCGCTCAGGTCCTTGGGGTGCGTCAGGCCTGGCTGGAGTATGGGGAAGGG
CCGATGTATCCGGTGGCGACGGCCGAGCCAGATAGCGCTGAATATCGCCTTTGCGGCCCCCCCGGCCTCGATGAGCGCGA
GGCTCGCCTGATCGTCGCCTACCGCCGGCTCGATGTCGCCTCACAAGCCGCTCTGGAGCACATCATCGACCGTATGATCC
CGCGCAACGGGGCCGGCCCTGACGGGCCGCATAGCCGGGACTCCTGA

Upstream 100 bases:

>100_bases
AGCGCAGTCACCCCGGCTTCGTCGCCCAGCCACTGCGGGACAACCAGCAATTGTCGTAACGACAACTGCCTTTTTGGGTC
GCCGTTCTTACGCTGCCCTC

Downstream 100 bases:

>100_bases
CCGATCCGTGCGTTGTGGGCCTACCCCCCTTCTGGTAAGGTTCCGCCATTCTGTTTCCCGGTCCATCCTTCCCTCAGCCT
GGCTCTGTCCATGACGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MARKTPRDQARAEFAERLRQAIHRCGIGPREYAELGRRVGVSKQAARLWVEGQNLPTRENIANLAQVLGVRQAWLEYGEG
PMYPVATAEPDSAEYRLCGPPGLDEREARLIVAYRRLDVASQAALEHIIDRMIPRNGAGPDGPHSRDS

Sequences:

>Translated_148_residues
MARKTPRDQARAEFAERLRQAIHRCGIGPREYAELGRRVGVSKQAARLWVEGQNLPTRENIANLAQVLGVRQAWLEYGEG
PMYPVATAEPDSAEYRLCGPPGLDEREARLIVAYRRLDVASQAALEHIIDRMIPRNGAGPDGPHSRDS
>Mature_147_residues
ARKTPRDQARAEFAERLRQAIHRCGIGPREYAELGRRVGVSKQAARLWVEGQNLPTRENIANLAQVLGVRQAWLEYGEGP
MYPVATAEPDSAEYRLCGPPGLDEREARLIVAYRRLDVASQAALEHIIDRMIPRNGAGPDGPHSRDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16496; Mature: 16365

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKTPRDQARAEFAERLRQAIHRCGIGPREYAELGRRVGVSKQAARLWVEGQNLPTREN
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
IANLAQVLGVRQAWLEYGEGPMYPVATAEPDSAEYRLCGPPGLDEREARLIVAYRRLDVA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
SQAALEHIIDRMIPRNGAGPDGPHSRDS
HHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARKTPRDQARAEFAERLRQAIHRCGIGPREYAELGRRVGVSKQAARLWVEGQNLPTREN
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
IANLAQVLGVRQAWLEYGEGPMYPVATAEPDSAEYRLCGPPGLDEREARLIVAYRRLDVA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
SQAALEHIIDRMIPRNGAGPDGPHSRDS
HHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA