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The map label for this gene is 121998192

Identifier: 121998192

GI number: 121998192

Start: 1524053

End: 1524247

Strand: Reverse

Name: 121998192

Synonym: Hhal_1410

Alternate gene names: NA

Gene position: 1524247-1524053 (Counterclockwise)

Preceding gene: 121998193

Following gene: 121998184

Centisome position: 56.91

GC content: 63.08

Gene sequence:

>195_bases
ATGTGGAGACTCTGGAAGCTTTACGATCCGCGCCGCGTCCTGATCGGCATCTTCTCCTGGCTGGCCGTGCTGGCCCTGGT
GATCCACTTCATCCTGCTGAGCACTGACCGGTTCAACTGGGTCGGTGGTGCTGCGGTCAGCTCGGTGAGTGAGTCCGCTG
AAGAGGTGTCCGCTCTGCCCCCGCGGCAGGTCTGA

Upstream 100 bases:

>100_bases
CCCCGGTGCCGAGGGCTACGGCTCCGTCATCGAGGGTGTTCACAACGTGACCGCCGCTGTTTCCCAAATTGCGCCGCTTG
CTGGTTAAGGAGATAGAACC

Downstream 100 bases:

>100_bases
CACCCGATCCCGGGTGACTCAGGAGTCTCTCCCGTTCGTCACGAGCGGGAGAGATTCTTCCCGGGTCTTCCTGCCGGACG
CGGCAGGATATGAGGAAAAA

Product: antenna complex, alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein alpha-1 chain; EHA-alpha-1 [H]

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MWRLWKLYDPRRVLIGIFSWLAVLALVIHFILLSTDRFNWVGGAAVSSVSESAEEVSALPPRQV

Sequences:

>Translated_64_residues
MWRLWKLYDPRRVLIGIFSWLAVLALVIHFILLSTDRFNWVGGAAVSSVSESAEEVSALPPRQV
>Mature_64_residues
MWRLWKLYDPRRVLIGIFSWLAVLALVIHFILLSTDRFNWVGGAAVSSVSESAEEVSALPPRQV

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex alpha subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002361
- InterPro:   IPR018332 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 7269; Mature: 7269

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00968 ANTENNA_COMP_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRLWKLYDPRRVLIGIFSWLAVLALVIHFILLSTDRFNWVGGAAVSSVSESAEEVSALP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
PRQV
CCCC
>Mature Secondary Structure
MWRLWKLYDPRRVLIGIFSWLAVLALVIHFILLSTDRFNWVGGAAVSSVSESAEEVSALP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
PRQV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577009 [H]