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The map label for this gene is 121998193

Identifier: 121998193

GI number: 121998193

Start: 1524260

End: 1524487

Strand: Reverse

Name: 121998193

Synonym: Hhal_1411

Alternate gene names: NA

Gene position: 1524487-1524260 (Counterclockwise)

Preceding gene: 121998196

Following gene: 121998192

Centisome position: 56.92

GC content: 60.09

Gene sequence:

>228_bases
ATGGCCGATAACATGTCGCTGACGGGCCTTAGCGATGAGGAAGCTAAGGAGTTCCACAGCATCTTCATGCAGAGCTTCCT
GATCTTCACGGCGGTTGCCGTCGTGGCCCACTTCCTCGCTTGGGCCTGGCGTCCGTGGATCCCCGGTGCCGAGGGCTACG
GCTCCGTCATCGAGGGTGTTCACAACGTGACCGCCGCTGTTTCCCAAATTGCGCCGCTTGCTGGTTAA

Upstream 100 bases:

>100_bases
CGGTCGAAACGGAAGTCCCACGTTAGCGTGGGCGACCACCCCCTACCGCGCGGGGGTAGAGCGCGGTACCGGCTGAAACG
CTGAACGGAGGACGAAACGT

Downstream 100 bases:

>100_bases
GGAGATAGAACCATGTGGAGACTCTGGAAGCTTTACGATCCGCGCCGCGTCCTGATCGGCATCTTCTCCTGGCTGGCCGT
GCTGGCCCTGGTGATCCACT

Product: antenna complex, alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein beta-1 chain; EHA-beta-1 [H]

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MADNMSLTGLSDEEAKEFHSIFMQSFLIFTAVAVVAHFLAWAWRPWIPGAEGYGSVIEGVHNVTAAVSQIAPLAG

Sequences:

>Translated_75_residues
MADNMSLTGLSDEEAKEFHSIFMQSFLIFTAVAVVAHFLAWAWRPWIPGAEGYGSVIEGVHNVTAAVSQIAPLAG
>Mature_74_residues
ADNMSLTGLSDEEAKEFHSIFMQSFLIFTAVAVVAHFLAWAWRPWIPGAEGYGSVIEGVHNVTAAVSQIAPLAG

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002362 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 8063; Mature: 7932

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNMSLTGLSDEEAKEFHSIFMQSFLIFTAVAVVAHFLAWAWRPWIPGAEGYGSVIEGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
HNVTAAVSQIAPLAG
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADNMSLTGLSDEEAKEFHSIFMQSFLIFTAVAVVAHFLAWAWRPWIPGAEGYGSVIEGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
HNVTAAVSQIAPLAG
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577009 [H]