Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998101

Identifier: 121998101

GI number: 121998101

Start: 1429751

End: 1430263

Strand: Reverse

Name: 121998101

Synonym: Hhal_1319

Alternate gene names: NA

Gene position: 1430263-1429751 (Counterclockwise)

Preceding gene: 121998102

Following gene: 121998100

Centisome position: 53.4

GC content: 66.28

Gene sequence:

>513_bases
ATGAGCTTTGAAGTCATTCGCGGATACGTCAGCGAAGTGGGGAAGGCCCGGGAGGCGAAAAGCGGTCGGGGCACGGAACG
CTTTAACGTGTCGGTGCGCGATACCGAGGGTCAGATCCGGAATCTGGAGTCCGTGGAGCTGTTCGGAAGCCTGGGGGAGC
GGCTGAGCACCGGGGCTTCGGTGGTGCTCGTGCGGCATTGGGACCGCCGCGGCCGCGGGCGGCTGGTTGCCGGCCACGTA
GACGGCGAGACGGAAGTCCACCGCTTCCCTGCTGAATTCCTGGGGGGGTGGGGCATCGGTATCTGTGCCCTGCTGCTGTC
ACTCGGCGCGGTGACCACTGGCTGGCTGGGGGCCCTGCTCGCTGTAGCCCTGGCCGTGCCCACCGGCCTACCGCTGGTGC
TGGTTGGTCAGCGTGAGGTGCAGGTGAAGTTCGAGACCTACCGTATCCTGCGTGAGGAGGGCCTGCTCGGCAGCGAGGAG
TCGATCAGCGGCTCTCAACAGCAACGAGCGTGA

Upstream 100 bases:

>100_bases
TGCGACAGGCGCTGCGTCCGGCCGGATATGACCGCATGATCCGCACGGTGCGCGGTGTGGGGTACCACCTGGATTCAAGC
CGAGCCGAGAAGGAGGCAGC

Downstream 100 bases:

>100_bases
TGCGCGCCTAGGCTTCTGCGTTGCTGGCCAGGGGCCATCTTGTTGCCCTCAGTTTTGCTCCGGGATCTGGGAACGTTGAT
GCGATGGAGCTGATCAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSFEVIRGYVSEVGKAREAKSGRGTERFNVSVRDTEGQIRNLESVELFGSLGERLSTGASVVLVRHWDRRGRGRLVAGHV
DGETEVHRFPAEFLGGWGIGICALLLSLGAVTTGWLGALLAVALAVPTGLPLVLVGQREVQVKFETYRILREEGLLGSEE
SISGSQQQRA

Sequences:

>Translated_170_residues
MSFEVIRGYVSEVGKAREAKSGRGTERFNVSVRDTEGQIRNLESVELFGSLGERLSTGASVVLVRHWDRRGRGRLVAGHV
DGETEVHRFPAEFLGGWGIGICALLLSLGAVTTGWLGALLAVALAVPTGLPLVLVGQREVQVKFETYRILREEGLLGSEE
SISGSQQQRA
>Mature_169_residues
SFEVIRGYVSEVGKAREAKSGRGTERFNVSVRDTEGQIRNLESVELFGSLGERLSTGASVVLVRHWDRRGRGRLVAGHVD
GETEVHRFPAEFLGGWGIGICALLLSLGAVTTGWLGALLAVALAVPTGLPLVLVGQREVQVKFETYRILREEGLLGSEES
ISGSQQQRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18402; Mature: 18271

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEVIRGYVSEVGKAREAKSGRGTERFNVSVRDTEGQIRNLESVELFGSLGERLSTGAS
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCE
VVLVRHWDRRGRGRLVAGHVDGETEVHRFPAEFLGGWGIGICALLLSLGAVTTGWLGALL
EEEEEECCCCCCCCEEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AVALAVPTGLPLVLVGQREVQVKFETYRILREEGLLGSEESISGSQQQRA
HHHHHHCCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SFEVIRGYVSEVGKAREAKSGRGTERFNVSVRDTEGQIRNLESVELFGSLGERLSTGAS
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCE
VVLVRHWDRRGRGRLVAGHVDGETEVHRFPAEFLGGWGIGICALLLSLGAVTTGWLGALL
EEEEEECCCCCCCCEEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AVALAVPTGLPLVLVGQREVQVKFETYRILREEGLLGSEESISGSQQQRA
HHHHHHCCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA