Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997914

Identifier: 121997914

GI number: 121997914

Start: 1219826

End: 1220266

Strand: Reverse

Name: 121997914

Synonym: Hhal_1123

Alternate gene names: NA

Gene position: 1220266-1219826 (Counterclockwise)

Preceding gene: 121997915

Following gene: 121997913

Centisome position: 45.56

GC content: 69.39

Gene sequence:

>441_bases
GTGCAGGAGGACGCCACCACCTACTGCCTGACACTGTTCGTGACGGAAGCGATGCGGGTCGCGGTCGGGCGGCTCGGCGT
GGTGGCGATTCCGGCCGGCTGGTGGGTGTACACGGGCAGCGCCAGGCGCAACATGGATGCCCGGATCGCACGGCACCTGC
GCCGGGAGAAGCCGCAGCGCTGGCACCTGGATTACCTGACGAGTGATTCGCGGGTCATTGTGGTTTCGGTCACCCGGCAC
ACCGAGCCGGAGTGTCAGCGCAACCGCCGCAACGGCGGTGTTGTAGTGGTGCCGGGCTTCGGTGCCAGCGACTGTGCGGC
CGGGTGCGGTAGCCACCTACGCTGGCTCGGGGCGACACCCGACCCGATCACCGCGGGGTCCGCGGGCGCCGCAGTCGGCT
GCTCCCTGTACCCCCTGGAACGAGGACACCCATGTACGTAG

Upstream 100 bases:

>100_bases
GACGAGGGGTTCAACGAGTACATCGTCAAGCCCTTCGAGCTGGAGCAGCTCGATGCGCTGATCCGGGAGGTCCGGTTGAG
TCGCTAGCCGGAGGGCCGCG

Downstream 100 bases:

>100_bases
ATCCCATGCCCCTGAGTGCCTACCCGTGGTACCTGCGCCCCTGGTTCTGGTGGCAGCGGCGGCGTGCCGGGTCGGTGGCG
GAGCCGATCCGCCTCTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQEDATTYCLTLFVTEAMRVAVGRLGVVAIPAGWWVYTGSARRNMDARIARHLRREKPQRWHLDYLTSDSRVIVVSVTRH
TEPECQRNRRNGGVVVVPGFGASDCAAGCGSHLRWLGATPDPITAGSAGAAVGCSLYPLERGHPCT

Sequences:

>Translated_146_residues
MQEDATTYCLTLFVTEAMRVAVGRLGVVAIPAGWWVYTGSARRNMDARIARHLRREKPQRWHLDYLTSDSRVIVVSVTRH
TEPECQRNRRNGGVVVVPGFGASDCAAGCGSHLRWLGATPDPITAGSAGAAVGCSLYPLERGHPCT
>Mature_146_residues
MQEDATTYCLTLFVTEAMRVAVGRLGVVAIPAGWWVYTGSARRNMDARIARHLRREKPQRWHLDYLTSDSRVIVVSVTRH
TEPECQRNRRNGGVVVVPGFGASDCAAGCGSHLRWLGATPDPITAGSAGAAVGCSLYPLERGHPCT

Specific function: Unknown

COG id: COG1833

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15877; Mature: 15877

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDATTYCLTLFVTEAMRVAVGRLGVVAIPAGWWVYTGSARRNMDARIARHLRREKPQR
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCE
WHLDYLTSDSRVIVVSVTRHTEPECQRNRRNGGVVVVPGFGASDCAAGCGSHLRWLGATP
EEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCEEEECCCCCHHHHHHCCCCEEECCCCC
DPITAGSAGAAVGCSLYPLERGHPCT
CCCCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MQEDATTYCLTLFVTEAMRVAVGRLGVVAIPAGWWVYTGSARRNMDARIARHLRREKPQR
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCE
WHLDYLTSDSRVIVVSVTRHTEPECQRNRRNGGVVVVPGFGASDCAAGCGSHLRWLGATP
EEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCEEEECCCCCHHHHHHCCCCEEECCCCC
DPITAGSAGAAVGCSLYPLERGHPCT
CCCCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA