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The map label for this gene is ynjA [H]

Identifier: 121997913

GI number: 121997913

Start: 1219239

End: 1219835

Strand: Reverse

Name: ynjA [H]

Synonym: Hhal_1122

Alternate gene names: 121997913

Gene position: 1219835-1219239 (Counterclockwise)

Preceding gene: 121997914

Following gene: 121997912

Centisome position: 45.54

GC content: 68.68

Gene sequence:

>597_bases
ATGTACGTAGATCCCATGCCCCTGAGTGCCTACCCGTGGTACCTGCGCCCCTGGTTCTGGTGGCAGCGGCGGCGTGCCGG
GTCGGTGGCGGAGCCGATCCGCCTCTGGGCGCGCCGGCCTCGGCTGCTGGCGCCGTTGCTGTTGCTCGGTGCTGCCTTCG
AACGCCGGCGGGCCGGTCTGGAACCAGGGTTGCGCGCCCTAGTGGGCCTGCGCGTGGGGCAGCTCAACGAATGCCCCTTC
ACGGTTGATCAGAACGCCCACAGCCTCCATCAACAGGGCGTGGCGTGGGAGAAGATCCGCACCGTCGCCGATTGGGCCGA
GCAGGAGGGGTTTACCGGGCGCGAGCGGGTGGTGCTCGGCTACGTCGAGGCGGTCACGCGCAGTGAGACCCCGGTCAGCG
CCGACGTGGTCGGGGCGGTGAAACGCCACTTGGATGATGACGCCCTGATCGAGCTGACCGGGCTGGTGGCATTCCACAAC
ATGACCACCAAGTTCAACAACGCGCTGGACGTTCCGCCCCAGGGGCTGTGCGTGCTGACCGTCAACGAGCGTGGCGAGGC
GGTAGCCTGGGAGGCGAACCCGGCCCGGGGGAAGTAG

Upstream 100 bases:

>100_bases
GCCACCTACGCTGGCTCGGGGCGACACCCGACCCGATCACCGCGGGGTCCGCGGGCGCCGCAGTCGGCTGCTCCCTGTAC
CCCCTGGAACGAGGACACCC

Downstream 100 bases:

>100_bases
AGTATCCTCCGGAGAGTGTGGATCCGAGCGACGAGGAGGTCCCGTGAGCACGCTCGACCAAGCCCTGATTGGCAACTGCG
CGTTTGCCGCCCTGGTCAAC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MYVDPMPLSAYPWYLRPWFWWQRRRAGSVAEPIRLWARRPRLLAPLLLLGAAFERRRAGLEPGLRALVGLRVGQLNECPF
TVDQNAHSLHQQGVAWEKIRTVADWAEQEGFTGRERVVLGYVEAVTRSETPVSADVVGAVKRHLDDDALIELTGLVAFHN
MTTKFNNALDVPPQGLCVLTVNERGEAVAWEANPARGK

Sequences:

>Translated_198_residues
MYVDPMPLSAYPWYLRPWFWWQRRRAGSVAEPIRLWARRPRLLAPLLLLGAAFERRRAGLEPGLRALVGLRVGQLNECPF
TVDQNAHSLHQQGVAWEKIRTVADWAEQEGFTGRERVVLGYVEAVTRSETPVSADVVGAVKRHLDDDALIELTGLVAFHN
MTTKFNNALDVPPQGLCVLTVNERGEAVAWEANPARGK
>Mature_198_residues
MYVDPMPLSAYPWYLRPWFWWQRRRAGSVAEPIRLWARRPRLLAPLLLLGAAFERRRAGLEPGLRALVGLRVGQLNECPF
TVDQNAHSLHQQGVAWEKIRTVADWAEQEGFTGRERVVLGYVEAVTRSETPVSADVVGAVKRHLDDDALIELTGLVAFHN
MTTKFNNALDVPPQGLCVLTVNERGEAVAWEANPARGK

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=171, Percent_Identity=36.8421052631579, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 22276; Mature: 22276

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVDPMPLSAYPWYLRPWFWWQRRRAGSVAEPIRLWARRPRLLAPLLLLGAAFERRRAGL
CCCCCCCCCCCCCHHCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
EPGLRALVGLRVGQLNECPFTVDQNAHSLHQQGVAWEKIRTVADWAEQEGFTGRERVVLG
CHHHHHHHHHHCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
YVEAVTRSETPVSADVVGAVKRHLDDDALIELTGLVAFHNMTTKFNNALDVPPQGLCVLT
HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
VNERGEAVAWEANPARGK
ECCCCCEEEEECCCCCCC
>Mature Secondary Structure
MYVDPMPLSAYPWYLRPWFWWQRRRAGSVAEPIRLWARRPRLLAPLLLLGAAFERRRAGL
CCCCCCCCCCCCCHHCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
EPGLRALVGLRVGQLNECPFTVDQNAHSLHQQGVAWEKIRTVADWAEQEGFTGRERVVLG
CHHHHHHHHHHCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
YVEAVTRSETPVSADVVGAVKRHLDDDALIELTGLVAFHNMTTKFNNALDVPPQGLCVLT
HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
VNERGEAVAWEANPARGK
ECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]