| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is cheA [H]
Identifier: 121997725
GI number: 121997725
Start: 1011000
End: 1013504
Strand: Reverse
Name: cheA [H]
Synonym: Hhal_0934
Alternate gene names: 121997725
Gene position: 1013504-1011000 (Counterclockwise)
Preceding gene: 121997735
Following gene: 121997722
Centisome position: 37.84
GC content: 75.85
Gene sequence:
>2505_bases ATGGATGAGCGACGAACCAAGGCCTTCGGCGTCGACCCCCGGCGCGAGCTGACCCGGCTGCTGCCCGAACTGCGCGACAG CGTCAGCGCCGCGGCGGTGCGTCTGCAGGAGGCGGGTGACGAGCCCGGCGCCCTGACCGCGCTCCACGGCGAGCTCCAGC GCCTGCACGGCGGTTTCCTGTTCGTCGGCGTACGCGAACTCGAGCACCTCAGTGCCGAGCTGCGCGGCGCCGCGGCCGAC CTGGAACGGGCCTACCAGTCGCCGGACGAGGGCGGGGTGGAGGTCCAGCCGCTGCGCGCGGCCCTGATGGATGCCGTGCT GCGGCTGCCCCGGGCCATCGAGCGCATCGCCGTACGGGCCGAGGACCCGGTGGCGGAGCTGGCCAGCCTCATCGACGGGC TGCGCCGCGCCCGCGGTCAGCCGCGCTACGACAGCCTGGCGCTGCTGCGTCAGTGCGTTGACCCGAGCGCGCCCGCGGCC CACGGCGAGGTCGCCGAGACCGCCCGCACCAGCCGTCTGGCCTACCAGCGCGGGCTCCTGGAGCTGATCCGCGGCGACGA ACGCCGGGCCCTCGGCCAGCTGCGCGGCGTCCTCGAGCCCCTGGAGGCGGCCCTGGGCGACAGCGCCGCCGGCAGCGCCT GCTGGAGCGCCCTGGCGGTGCTCGATCTGCTGGAGCAGGGCGAGACCCTGGATCCGGGGCAGAAGCGGGCGATTGCCGCC TACGACCGCGAGCTGCGCCGGCTGCTCGAGCACGGTGCAGTGGGCGGGCTCCCCGAATCGAGCATGGCCGAGGCGCTGCT CCAGCCGCTCACCGAGGCGCCGGGCACCGGCCGGGTGGGCCAGGTCCAGGCGGCCGCCCGGCGCTTGCCCGGGGCCACCC TGGCCATGCCGCCCCCGGCCGAGGATGAGGCCGGGGCGGCCTCGCGGGCGCTGGTGCGCAGCGACGTCGATCTGCAGGCG CTGTTCTACGCCGAGGTGGGGCCGGCGCTGTCGCAGATCGGCGCCGCCCTGCAGCGCTGGCGCGCCGGCGACCCAGAGGC GGGGCTGGCCATCCAGCGCATCCTGCACACCCTCAAGGGCGGGGCGCGCTTCGCTGGCCTCACCGAGTTCTTCGCCCACT GCCACGAACTCGAGGGCGAGGTGGCCACGGCGCTGGCGGATGGCGCTACCGCCGGGACCGCTCAGCGCCTGCGCCACGAA CTGGAGCAACTGGCCGACCGGGTCGGCGTGCTGCGCCGCGAGGTCCTGGGTCACACCGCGGAGCCGGGCGCCGAGCCGGA CGCTGAAGCGGCGGCCTTCGATTACGGCGAGCTGTGGGCCGACGAGGACCCGGAGCCGTCCCCTGCGGAGGATGGCTGGG AGCTGCAGACCGGATCCAGCGCCGAGGTGCTCGGCGACGCCCTGGCCGCCGAATTGGCCGCAACGGAGGACGAGGCCGCC GACGCGGACGCCGACCCGCCGGATCCCGCCACCGAGTCGGCTCCGGTCGCGGAACCGGCTCGTGACCCCGAGCCGGCGCT GGCGACCCTGGAGCCGGACATCGACGCCCTCGATCGACAGGTCCACGCCACCGCCGGCGAGTATGGCCGGCGTGTCGAGC TGGTCGTGGAGGGGGCGTCCCGCGCGCTGCCCGAGGCCTATCTGGAGGCCCTGCGGCCGGCGCTGGAGCACCTGCTGCGC AACGCCGTGCGCCACGGTATTGAACCCCCCGAGGCGCGCAGTGCCGCCGGTAAGCCGGAGGTCGGCCGAGTTGGGCTCAG CCTGCGCTACGGCCAGGACGAGGTGCTGCTGGTGGTCAGTGACGACGGCGCCGGACTCGACACCGAGGCGCTGCAGCGCC AGGTCTCCGACTACGACCCCAACGAGCCCACCGCGGCCCTCAGCGACGATGAGGCGCTGAGCCTGATCTGCCTGCCGGGG GTCTCCACGCTGGGGCCGGAGGGCGACCCGGGGGCCGGCATGGGCATGGACGAGGTCGCCGGCGTGGTCCACGAACTCGG TGGCACGCTGGAGATGCAGAGCGCCCCGGGGGCCGGCGCCCGCTTCACCCTGCGGCTGCCCATGCGCGGGGCGAAGGCCG CGGAGCAGCCCCCCGGCGAGGCCCCCGAGCGGCCTCGCATCCTGGTCCTCGACGACTCGCGCACCATGCGCCGGATCACC GGTCATCGGCTGGCGCGCCAGGGCTTCGACCCGGAGGGCGCCGCCGGCCTCGACGAGGCGCGGCGCGCCGTGGCCGAGCG CGCGCCGCGGGCGGTGCTCATCGACCTGGAGATGGAGATGCTCCAGCACGAGGAGGGGCTCGGCGTGCTCCAGCGCCTGG TGGCCGAGGCCGGGATCGCCGCCGGGGCGGTGGTCGCGGTGAGCACCCGGGCCGTCGATCAGGAGCGGCTCGCGGCCGCG GGGCTGGGCGCGGCGCGGGTGCTGCTCAAGCCCTACGACGAGGGCCAGCTTGCCGACGCCCTGGCCCAGGCGTGCGCTGC ACTGGAGGGCGGCGAGCCGGGCTAG
Upstream 100 bases:
>100_bases CGGGGCTTGATGGCGGCGATGGGGTCCATCACCACGCCGAGTCGGGCGCTCATGGGCAGATTCACGGCAGCTGAGTGGTT TGTGGCATTGTAACCAACCC
Downstream 100 bases:
>100_bases AGTTCGCCCAGGGCGAGGCCGACGGCGGCGAGGGCGACCACGGCGGCGGTCTCCGTGCGCAGGACCCGGGGGCCCACCCG CCCGCGGAGGAAACCGTGTT
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 834; Mature: 834
Protein sequence:
>834_residues MDERRTKAFGVDPRRELTRLLPELRDSVSAAAVRLQEAGDEPGALTALHGELQRLHGGFLFVGVRELEHLSAELRGAAAD LERAYQSPDEGGVEVQPLRAALMDAVLRLPRAIERIAVRAEDPVAELASLIDGLRRARGQPRYDSLALLRQCVDPSAPAA HGEVAETARTSRLAYQRGLLELIRGDERRALGQLRGVLEPLEAALGDSAAGSACWSALAVLDLLEQGETLDPGQKRAIAA YDRELRRLLEHGAVGGLPESSMAEALLQPLTEAPGTGRVGQVQAAARRLPGATLAMPPPAEDEAGAASRALVRSDVDLQA LFYAEVGPALSQIGAALQRWRAGDPEAGLAIQRILHTLKGGARFAGLTEFFAHCHELEGEVATALADGATAGTAQRLRHE LEQLADRVGVLRREVLGHTAEPGAEPDAEAAAFDYGELWADEDPEPSPAEDGWELQTGSSAEVLGDALAAELAATEDEAA DADADPPDPATESAPVAEPARDPEPALATLEPDIDALDRQVHATAGEYGRRVELVVEGASRALPEAYLEALRPALEHLLR NAVRHGIEPPEARSAAGKPEVGRVGLSLRYGQDEVLLVVSDDGAGLDTEALQRQVSDYDPNEPTAALSDDEALSLICLPG VSTLGPEGDPGAGMGMDEVAGVVHELGGTLEMQSAPGAGARFTLRLPMRGAKAAEQPPGEAPERPRILVLDDSRTMRRIT GHRLARQGFDPEGAAGLDEARRAVAERAPRAVLIDLEMEMLQHEEGLGVLQRLVAEAGIAAGAVVAVSTRAVDQERLAAA GLGAARVLLKPYDEGQLADALAQACAALEGGEPG
Sequences:
>Translated_834_residues MDERRTKAFGVDPRRELTRLLPELRDSVSAAAVRLQEAGDEPGALTALHGELQRLHGGFLFVGVRELEHLSAELRGAAAD LERAYQSPDEGGVEVQPLRAALMDAVLRLPRAIERIAVRAEDPVAELASLIDGLRRARGQPRYDSLALLRQCVDPSAPAA HGEVAETARTSRLAYQRGLLELIRGDERRALGQLRGVLEPLEAALGDSAAGSACWSALAVLDLLEQGETLDPGQKRAIAA YDRELRRLLEHGAVGGLPESSMAEALLQPLTEAPGTGRVGQVQAAARRLPGATLAMPPPAEDEAGAASRALVRSDVDLQA LFYAEVGPALSQIGAALQRWRAGDPEAGLAIQRILHTLKGGARFAGLTEFFAHCHELEGEVATALADGATAGTAQRLRHE LEQLADRVGVLRREVLGHTAEPGAEPDAEAAAFDYGELWADEDPEPSPAEDGWELQTGSSAEVLGDALAAELAATEDEAA DADADPPDPATESAPVAEPARDPEPALATLEPDIDALDRQVHATAGEYGRRVELVVEGASRALPEAYLEALRPALEHLLR NAVRHGIEPPEARSAAGKPEVGRVGLSLRYGQDEVLLVVSDDGAGLDTEALQRQVSDYDPNEPTAALSDDEALSLICLPG VSTLGPEGDPGAGMGMDEVAGVVHELGGTLEMQSAPGAGARFTLRLPMRGAKAAEQPPGEAPERPRILVLDDSRTMRRIT GHRLARQGFDPEGAAGLDEARRAVAERAPRAVLIDLEMEMLQHEEGLGVLQRLVAEAGIAAGAVVAVSTRAVDQERLAAA GLGAARVLLKPYDEGQLADALAQACAALEGGEPG >Mature_834_residues MDERRTKAFGVDPRRELTRLLPELRDSVSAAAVRLQEAGDEPGALTALHGELQRLHGGFLFVGVRELEHLSAELRGAAAD LERAYQSPDEGGVEVQPLRAALMDAVLRLPRAIERIAVRAEDPVAELASLIDGLRRARGQPRYDSLALLRQCVDPSAPAA HGEVAETARTSRLAYQRGLLELIRGDERRALGQLRGVLEPLEAALGDSAAGSACWSALAVLDLLEQGETLDPGQKRAIAA YDRELRRLLEHGAVGGLPESSMAEALLQPLTEAPGTGRVGQVQAAARRLPGATLAMPPPAEDEAGAASRALVRSDVDLQA LFYAEVGPALSQIGAALQRWRAGDPEAGLAIQRILHTLKGGARFAGLTEFFAHCHELEGEVATALADGATAGTAQRLRHE LEQLADRVGVLRREVLGHTAEPGAEPDAEAAAFDYGELWADEDPEPSPAEDGWELQTGSSAEVLGDALAAELAATEDEAA DADADPPDPATESAPVAEPARDPEPALATLEPDIDALDRQVHATAGEYGRRVELVVEGASRALPEAYLEALRPALEHLLR NAVRHGIEPPEARSAAGKPEVGRVGLSLRYGQDEVLLVVSDDGAGLDTEALQRQVSDYDPNEPTAALSDDEALSLICLPG VSTLGPEGDPGAGMGMDEVAGVVHELGGTLEMQSAPGAGARFTLRLPMRGAKAAEQPPGEAPERPRILVLDDSRTMRRIT GHRLARQGFDPEGAAGLDEARRAVAERAPRAVLIDLEMEMLQHEEGLGVLQRLVAEAGIAAGAVVAVSTRAVDQERLAAA GLGAARVLLKPYDEGQLADALAQACAALEGGEPG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=232, Percent_Identity=34.051724137931, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 87873; Mature: 87873
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERRTKAFGVDPRRELTRLLPELRDSVSAAAVRLQEAGDEPGALTALHGELQRLHGGFL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEE FVGVRELEHLSAELRGAAADLERAYQSPDEGGVEVQPLRAALMDAVLRLPRAIERIAVRA EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EDPVAELASLIDGLRRARGQPRYDSLALLRQCVDPSAPAAHGEVAETARTSRLAYQRGLL CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELIRGDERRALGQLRGVLEPLEAALGDSAAGSACWSALAVLDLLEQGETLDPGQKRAIAA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH YDRELRRLLEHGAVGGLPESSMAEALLQPLTEAPGTGRVGQVQAAARRLPGATLAMPPPA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCC EDEAGAASRALVRSDVDLQALFYAEVGPALSQIGAALQRWRAGDPEAGLAIQRILHTLKG CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC GARFAGLTEFFAHCHELEGEVATALADGATAGTAQRLRHELEQLADRVGVLRREVLGHTA CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPGAEPDAEAAAFDYGELWADEDPEPSPAEDGWELQTGSSAEVLGDALAAELAATEDEAA CCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCC DADADPPDPATESAPVAEPARDPEPALATLEPDIDALDRQVHATAGEYGRRVELVVEGAS CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCHH RALPEAYLEALRPALEHLLRNAVRHGIEPPEARSAAGKPEVGRVGLSLRYGQDEVLLVVS HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCEEEEEC DDGAGLDTEALQRQVSDYDPNEPTAALSDDEALSLICLPGVSTLGPEGDPGAGMGMDEVA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH GVVHELGGTLEMQSAPGAGARFTLRLPMRGAKAAEQPPGEAPERPRILVLDDSRTMRRIT HHHHHHCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHH GHRLARQGFDPEGAAGLDEARRAVAERAPRAVLIDLEMEMLQHEEGLGVLQRLVAEAGIA HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHCCH AGAVVAVSTRAVDQERLAAAGLGAARVLLKPYDEGQLADALAQACAALEGGEPG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDERRTKAFGVDPRRELTRLLPELRDSVSAAAVRLQEAGDEPGALTALHGELQRLHGGFL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEE FVGVRELEHLSAELRGAAADLERAYQSPDEGGVEVQPLRAALMDAVLRLPRAIERIAVRA EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EDPVAELASLIDGLRRARGQPRYDSLALLRQCVDPSAPAAHGEVAETARTSRLAYQRGLL CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELIRGDERRALGQLRGVLEPLEAALGDSAAGSACWSALAVLDLLEQGETLDPGQKRAIAA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH YDRELRRLLEHGAVGGLPESSMAEALLQPLTEAPGTGRVGQVQAAARRLPGATLAMPPPA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCC EDEAGAASRALVRSDVDLQALFYAEVGPALSQIGAALQRWRAGDPEAGLAIQRILHTLKG CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC GARFAGLTEFFAHCHELEGEVATALADGATAGTAQRLRHELEQLADRVGVLRREVLGHTA CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPGAEPDAEAAAFDYGELWADEDPEPSPAEDGWELQTGSSAEVLGDALAAELAATEDEAA CCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCC DADADPPDPATESAPVAEPARDPEPALATLEPDIDALDRQVHATAGEYGRRVELVVEGAS CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCHH RALPEAYLEALRPALEHLLRNAVRHGIEPPEARSAAGKPEVGRVGLSLRYGQDEVLLVVS HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCEEEEEC DDGAGLDTEALQRQVSDYDPNEPTAALSDDEALSLICLPGVSTLGPEGDPGAGMGMDEVA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH GVVHELGGTLEMQSAPGAGARFTLRLPMRGAKAAEQPPGEAPERPRILVLDDSRTMRRIT HHHHHHCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHH GHRLARQGFDPEGAAGLDEARRAVAERAPRAVLIDLEMEMLQHEEGLGVLQRLVAEAGIA HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHCCH AGAVVAVSTRAVDQERLAAAGLGAARVLLKPYDEGQLADALAQACAALEGGEPG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9989504 [H]