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The map label for this gene is ribE [H]

Identifier: 121997690

GI number: 121997690

Start: 974984

End: 975643

Strand: Reverse

Name: ribE [H]

Synonym: Hhal_0899

Alternate gene names: 121997690

Gene position: 975643-974984 (Counterclockwise)

Preceding gene: 121997691

Following gene: 121997689

Centisome position: 36.43

GC content: 71.97

Gene sequence:

>660_bases
ATGTTCACCGGGATCGTGGAGACCTGCGGCCGCGTGGCCGCCATCGAGCACAGCGGCGAGGGGCGGATCCTGCGCATCGA
TGCTCCCCGGCTGGGCCTGGCGGAGTGCCGGATCGGCGACAGCATCGCCGTCGACGGCGCCTGCCTGACCGCCACCGGGA
TCGAGGATGGGCAGTTCCGTGCCGACGTCTCCGATGAGACCCTGCGCTGCACCACCCTGGGCGGGTTGCGCAGCGGGGTG
CGGGTCAACCTGGAGCGGGCGGTCACCCCGTCGACGCCGCTGGGCGGGCACCTGGTGACCGGACATGTCGACGGCGTCGG
CGAGGTGGTCGAGCGGGCCCCCGCCGGGGGGTCCGAGCGCTGGCGCTTCCGGGTCCCGGAGGGGCTGGCCCGCTATGTGG
CGGTCAAGGGCTCCATCGCCGTGGCCGGGGTCAGCCTGACCATTAACGCCGTCGCTGGACGGGAGTTCGAGGTCAACCTG
ATCCCGCACACCCTCGACGCCACCAACCTGGGGGAACGCCGCGCCGGCGATCCGGTCAACATCGAGGTGGACCTGGTGGC
CCGTTACGTCGAGCGGCTGCTCAGCGCCGGTGCCGACAGTGGCGACGGCGGGGGGCTGACCCTGGAGCAGCTACGACAGG
CCGGATTCGGCAATGGATGA

Upstream 100 bases:

>100_bases
CCCGGCATCGAGACCATGGCGCAGCGCCAACCGCTGGCGTTCAGCGATGTCCGGCGGGTGGGTGAGGAAATCCGCATCAC
CGCGAGGTTGGTTTAACCGC

Downstream 100 bases:

>100_bases
ACGAATGAGCGAGACGGTGCAGTTCAACAGTATCGAGGAGATCATCGAGGACCTGCGCCAGGGGCGCATGGCGGTCGTCC
TCGATGACGAAGACCGGGAG

Product: riboflavin synthase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFTGIVETCGRVAAIEHSGEGRILRIDAPRLGLAECRIGDSIAVDGACLTATGIEDGQFRADVSDETLRCTTLGGLRSGV
RVNLERAVTPSTPLGGHLVTGHVDGVGEVVERAPAGGSERWRFRVPEGLARYVAVKGSIAVAGVSLTINAVAGREFEVNL
IPHTLDATNLGERRAGDPVNIEVDLVARYVERLLSAGADSGDGGGLTLEQLRQAGFGNG

Sequences:

>Translated_219_residues
MFTGIVETCGRVAAIEHSGEGRILRIDAPRLGLAECRIGDSIAVDGACLTATGIEDGQFRADVSDETLRCTTLGGLRSGV
RVNLERAVTPSTPLGGHLVTGHVDGVGEVVERAPAGGSERWRFRVPEGLARYVAVKGSIAVAGVSLTINAVAGREFEVNL
IPHTLDATNLGERRAGDPVNIEVDLVARYVERLLSAGADSGDGGGLTLEQLRQAGFGNG
>Mature_219_residues
MFTGIVETCGRVAAIEHSGEGRILRIDAPRLGLAECRIGDSIAVDGACLTATGIEDGQFRADVSDETLRCTTLGGLRSGV
RVNLERAVTPSTPLGGHLVTGHVDGVGEVVERAPAGGSERWRFRVPEGLARYVAVKGSIAVAGVSLTINAVAGREFEVNL
IPHTLDATNLGERRAGDPVNIEVDLVARYVERLLSAGADSGDGGGLTLEQLRQAGFGNG

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The alpha subunit catalyze

COG id: COG0307

COG function: function code H; Riboflavin synthase alpha chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 lumazine-binding repeats [H]

Homologues:

Organism=Escherichia coli, GI1787952, Length=210, Percent_Identity=37.1428571428571, Blast_Score=129, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6319733, Length=205, Percent_Identity=38.5365853658537, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001783
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00677 Lum_binding [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 22797; Mature: 22797

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGIVETCGRVAAIEHSGEGRILRIDAPRLGLAECRIGDSIAVDGACLTATGIEDGQFR
CCCCHHHHCCCEEEEEECCCCCEEEECCCCCCHHHCCCCCCEEECCEEEEECCCCCCCEE
ADVSDETLRCTTLGGLRSGVRVNLERAVTPSTPLGGHLVTGHVDGVGEVVERAPAGGSER
ECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCC
WRFRVPEGLARYVAVKGSIAVAGVSLTINAVAGREFEVNLIPHTLDATNLGERRAGDPVN
EEEECCHHHHHHEEECCCEEEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCE
IEVDLVARYVERLLSAGADSGDGGGLTLEQLRQAGFGNG
EEHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCC
>Mature Secondary Structure
MFTGIVETCGRVAAIEHSGEGRILRIDAPRLGLAECRIGDSIAVDGACLTATGIEDGQFR
CCCCHHHHCCCEEEEEECCCCCEEEECCCCCCHHHCCCCCCEEECCEEEEECCCCCCCEE
ADVSDETLRCTTLGGLRSGVRVNLERAVTPSTPLGGHLVTGHVDGVGEVVERAPAGGSER
ECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCC
WRFRVPEGLARYVAVKGSIAVAGVSLTINAVAGREFEVNLIPHTLDATNLGERRAGDPVN
EEEECCHHHHHHEEECCCEEEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCE
IEVDLVARYVERLLSAGADSGDGGGLTLEQLRQAGFGNG
EEHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8522537 [H]