Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is lnt [H]

Identifier: 121997680

GI number: 121997680

Start: 965947

End: 967479

Strand: Reverse

Name: lnt [H]

Synonym: Hhal_0889

Alternate gene names: 121997680

Gene position: 967479-965947 (Counterclockwise)

Preceding gene: 121997681

Following gene: 121997676

Centisome position: 36.12

GC content: 72.86

Gene sequence:

>1533_bases
ATGAGGACGGCTGAGCGCCTGGCCGCCGGGCGTGCCGGTGTGCTCGCGGCCGGGCTGGCTGGGGGTTTGCTGCCCCTGGC
GTTGGCCCCGCTGGGCTGGGCCGTGCTGGCGGTGCTGTCCCCCGCCGTGCTCTTCGCCGTGGCGGCGCTGGCGCCACGGC
GGCGCGCCCTGCAGGCCGGCTACGCCTTCGGGCTGGGCCAGTTCGGGGTCGGCGTCTCCTGGGTCTTTGTCAGCATCAAC
GATTACGGCGGCGCCGGTCCGGTGCTCTCCGGGGGAGTCACCGTGCTCTTCGTGGCCTTCCTGGCCCTCTTCCCCCTACT
GGCGGTGGTGCTCGGACGGGGGCTGGGGCGCTGCTCCGGGGTGCGCCTGCTGGTGACTCTGCCAGCGGCGTGGGTGGCGG
TGGAGTGGCTGCGCACCTGGCTGTTCACCGGCTTCCCGTGGCTGTTTGTCGGCTACGCCGCCCTAGATACCCCGCTGGCT
GGCCTGGCGCCGGTGATCGGCGTGCTCGGCCTGAGCGCCCTGCTGGTATTGCTGGCCGGGGCCGCGGCGTGGCTGGTGGT
GGCCCCGGGGTGGCGGCGCGCGGCCAGTGTGGCGGCGTTGCTGGTGGCCGCGGTGGCTGCCGGCGTGGCGGCGGATCGGC
CGTGGACCGAGGCCCACGGCGAGCCGGTGCGTGCGGCGCTGCTCCAGGGCAACTTCAGTCAGGACCTCAAGTGGGACCCG
GCGGAGCTCCAGCGCATCCAGACCCGCTACGCCGAGCTGACTGCCGAGCACCCGGAGGCGGACCTGGTGATCTGGCCGGA
GACGGCCATCCCGCGCCGCTTCGATGCGGTGCAGCCGTATCTAGAGCAGGTGGCCGAGCAGGTCCGCGAGACCGGCGGCA
CCCTGGTGCTCGGCATCCCCTACCAGGAGTGGGCCCCGGATGGCAGTCAGCTGCACAACAGCGTGGCCGTCCTTGGCGAG
GAGCGTGACGTCTACCACAAGCGTCATCTGGTCCCCTACGGCGAGTACGTGCCGTTCCGCGACCTCTTCGGCCGCAGCCT
CGACTTCCTCGGCGCCCCGATGGCCGACTACAGCCGCGGGCCCCGGCCGGAGCCGCTGGCCGTCGACAACCGCCTGCGTC
TCGGGGCCACAATCTGTTACGAGGTGGCCTACCCGGTGGCCGTGCGGCGCACGGCGGGAGAGGTGGACCTGCTGGTCAAC
GTCAGCAACGACGCCTGGTTCGGTGACTCCCTGGCGCCCCATCAGCACCTGCAGAAGGCGCGCATGCGCGCTGCGGAGTC
CGGGCGCTGGATGCTGCGTGCGACCAATACCGGCATCACCGCCGTGATCGGTCCCGACGGTGAGGTGGTCGAGCGTCGAC
CGCAGTTCGAGGTGGCCACCCTCGCCACCGAGGTCGAGCGCCGCAGCGGCACCACCCCCTACGCCCGCATCGGCGACGGT
CCCCTGCTGGGACTGCTGGCCGCTGCGCTGCTGCTGCCCGGAGGGTTGCGGTGGTATCGCCGGCGGCGGGTCGGCGGGTC
AGCCGCCGAGTGA

Upstream 100 bases:

>100_bases
GGCGAGCGCATCGTCTTTGCCGGCTTCGAGTTCCGGGTGCTGCGCGCCGATCAGCGCCGCATCCACCTGCTGCGGGTCAT
GCCCGTGGGAAGTGAGGGCC

Downstream 100 bases:

>100_bases
GCCCAGCCAGGGCAGGACCACCGGCAGCAGGAAGGCGGTCACCAGCCCGGCCAGCCCCAGGCCCAGGCCGGCGAAGGCGC
CGGCGGCGGCGCTGCTGCTG

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAGYAFGLGQFGVGVSWVFVSIN
DYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSGVRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLA
GLAPVIGVLGLSALLVLLAGAAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP
AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIPYQEWAPDGSQLHNSVAVLGE
ERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRGPRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVN
VSNDAWFGDSLAPHQHLQKARMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG
PLLGLLAAALLLPGGLRWYRRRRVGGSAAE

Sequences:

>Translated_510_residues
MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAGYAFGLGQFGVGVSWVFVSIN
DYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSGVRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLA
GLAPVIGVLGLSALLVLLAGAAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP
AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIPYQEWAPDGSQLHNSVAVLGE
ERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRGPRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVN
VSNDAWFGDSLAPHQHLQKARMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG
PLLGLLAAALLLPGGLRWYRRRRVGGSAAE
>Mature_510_residues
MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAGYAFGLGQFGVGVSWVFVSIN
DYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSGVRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLA
GLAPVIGVLGLSALLVLLAGAAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP
AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIPYQEWAPDGSQLHNSVAVLGE
ERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRGPRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVN
VSNDAWFGDSLAPHQHLQKARMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG
PLLGLLAAALLLPGGLRWYRRRRVGGSAAE

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=502, Percent_Identity=38.2470119521912, Blast_Score=298, Evalue=7e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 54520; Mature: 54520

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50263 CN_HYDROLASE ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAG
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAFGLGQFGVGVSWVFVSINDYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSG
HHHCCHHHCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLAGLAPVIGVLGLSALLVLLAG
CEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP
HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCCCCH
AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIP
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
YQEWAPDGSQLHNSVAVLGEERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRG
HHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCHHHHCCCHHHHCCC
PRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVNVSNDAWFGDSLAPHQHLQKA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
RMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG
HHHHHCCCCEEEEEECCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCC
PLLGLLAAALLLPGGLRWYRRRRVGGSAAE
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAG
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAFGLGQFGVGVSWVFVSINDYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSG
HHHCCHHHCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLAGLAPVIGVLGLSALLVLLAG
CEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP
HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCCCCH
AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIP
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
YQEWAPDGSQLHNSVAVLGEERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRG
HHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCHHHHCCCHHHHCCC
PRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVNVSNDAWFGDSLAPHQHLQKA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
RMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG
HHHHHCCCCEEEEEECCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCC
PLLGLLAAALLLPGGLRWYRRRRVGGSAAE
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA