| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997537
Identifier: 121997537
GI number: 121997537
Start: 829445
End: 830503
Strand: Reverse
Name: 121997537
Synonym: Hhal_0741
Alternate gene names: NA
Gene position: 830503-829445 (Counterclockwise)
Preceding gene: 121997538
Following gene: 121997536
Centisome position: 31.01
GC content: 68.46
Gene sequence:
>1059_bases ATGCGCGACCTGCGTGCCGAGCACGCCGGCCTGGAAGAGGAGCTGGAGTCGCTGCGTCAGCGCCGCTCCAACATCCCGGC GCGCATGCTGGAGCTGCGCCAGCGCCTGTGCCAGGAGCTGAGCCTCGATGAGGAGGCCGTCCCCTTCGCCGGTGAGCTCC TCCAGGTCCATGAGCAGGAGACGGACTGGGAGGGGGCCATCGAGCGGCTGCTCCACAACTTCGGCCTCTCGCTCCTGGTC CCGGAGGCGCACTACCGCGCCGTGGCCGGCTGGGTGGATCGCAGCCACCTGCGTGGCCGGCTGGTCTACTACCGGGTGCG CGAGCCGCGCAGCAGTGAGCCGCCCGCGCTGCACCCCGAGTCCCTGGTGCGTAAGATCGCCATCCGTCCCGACTCGGCGT TCTACGCCTGGCTGGAGCAGGAGCTGGGTCGGCGCTTCGACTACGCCTGCACCCGGGATCTGGAGACCTTCCGGCGCGAG GATCGCGCCATCACCCCGGCCGGGCAGATCAAGGCGGGCGGGGATCGCCACGAGAAGGACGACCGCCACCGCATCGACGA CCGCTCCCGCTTCGTCCTCGGCTGGTCCAACGAGGCGAAGATCGCCGCCCTCCAGGAGGACGACCTGCCCCGCTTCGAGG CCCGGTTCAAGGAGCTGCTCAACGAGAACACCATCCGCGAGATCGCCAACTTCAACGCCCAGCTCAACAAAGAGCGCGCG CAGATCCGCGAGCGCATCGCAACCATCAACGCCTCGCTGTTCGATATCGACTACAACTCGGGGCGCTACATCGAGCTGGT CGCCGACACCACCACCGACCCCGAGGTCCGCGACTTCCGCGAGCAGCTCCGGGCCTGCACCGAGGATACGGTGACCGGCT CCGAGGACGCCCAGTACAACGAGCGCAAGTTCCTCCAGGTCAGGGCGATCATCGAGCGCTTCGTCGCCAGTGTCGGCTTC GTCCACGGCGAAGGCGGGTGCTTCTCGCTGCTGCGCCATCTGAGCATCGAGGCGTACCACGCCGAAAAGGCCATCCGGCG CGCGGCAACCAGCGGATGA
Upstream 100 bases:
>100_bases GGTCTTCCGCGCCAACCAGCAGGCAGCGGCCGGCGAGCGCGAGGCCGCCGAAGAGGCGCTGACCCGGCTCCAGAACCAGC AAACCGAGGCGCAGGTGAGC
Downstream 100 bases:
>100_bases GCTGGACGACCCCCGCCGATCTGCGCCAGCAGGTGCAGAAGCGCTGGGATCGGGGCGAACTGCTCGCTGCGCGGGTGACC GGTGCCGCGCTCTTCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRDLRAEHAGLEEELESLRQRRSNIPARMLELRQRLCQELSLDEEAVPFAGELLQVHEQETDWEGAIERLLHNFGLSLLV PEAHYRAVAGWVDRSHLRGRLVYYRVREPRSSEPPALHPESLVRKIAIRPDSAFYAWLEQELGRRFDYACTRDLETFRRE DRAITPAGQIKAGGDRHEKDDRHRIDDRSRFVLGWSNEAKIAALQEDDLPRFEARFKELLNENTIREIANFNAQLNKERA QIRERIATINASLFDIDYNSGRYIELVADTTTDPEVRDFREQLRACTEDTVTGSEDAQYNERKFLQVRAIIERFVASVGF VHGEGGCFSLLRHLSIEAYHAEKAIRRAATSG
Sequences:
>Translated_352_residues MRDLRAEHAGLEEELESLRQRRSNIPARMLELRQRLCQELSLDEEAVPFAGELLQVHEQETDWEGAIERLLHNFGLSLLV PEAHYRAVAGWVDRSHLRGRLVYYRVREPRSSEPPALHPESLVRKIAIRPDSAFYAWLEQELGRRFDYACTRDLETFRRE DRAITPAGQIKAGGDRHEKDDRHRIDDRSRFVLGWSNEAKIAALQEDDLPRFEARFKELLNENTIREIANFNAQLNKERA QIRERIATINASLFDIDYNSGRYIELVADTTTDPEVRDFREQLRACTEDTVTGSEDAQYNERKFLQVRAIIERFVASVGF VHGEGGCFSLLRHLSIEAYHAEKAIRRAATSG >Mature_352_residues MRDLRAEHAGLEEELESLRQRRSNIPARMLELRQRLCQELSLDEEAVPFAGELLQVHEQETDWEGAIERLLHNFGLSLLV PEAHYRAVAGWVDRSHLRGRLVYYRVREPRSSEPPALHPESLVRKIAIRPDSAFYAWLEQELGRRFDYACTRDLETFRRE DRAITPAGQIKAGGDRHEKDDRHRIDDRSRFVLGWSNEAKIAALQEDDLPRFEARFKELLNENTIREIANFNAQLNKERA QIRERIATINASLFDIDYNSGRYIELVADTTTDPEVRDFREQLRACTEDTVTGSEDAQYNERKFLQVRAIIERFVASVGF VHGEGGCFSLLRHLSIEAYHAEKAIRRAATSG
Specific function: Unknown
COG id: COG4913
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40769; Mature: 40769
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLRAEHAGLEEELESLRQRRSNIPARMLELRQRLCQELSLDEEAVPFAGELLQVHEQE CCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC TDWEGAIERLLHNFGLSLLVPEAHYRAVAGWVDRSHLRGRLVYYRVREPRSSEPPALHPE CCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHH SLVRKIAIRPDSAFYAWLEQELGRRFDYACTRDLETFRREDRAITPAGQIKAGGDRHEKD HHHHHHHCCCCHHHHHHHHHHHCHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DRHRIDDRSRFVLGWSNEAKIAALQEDDLPRFEARFKELLNENTIREIANFNAQLNKERA HHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH QIRERIATINASLFDIDYNSGRYIELVADTTTDPEVRDFREQLRACTEDTVTGSEDAQYN HHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH ERKFLQVRAIIERFVASVGFVHGEGGCFSLLRHLSIEAYHAEKAIRRAATSG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRDLRAEHAGLEEELESLRQRRSNIPARMLELRQRLCQELSLDEEAVPFAGELLQVHEQE CCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC TDWEGAIERLLHNFGLSLLVPEAHYRAVAGWVDRSHLRGRLVYYRVREPRSSEPPALHPE CCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHH SLVRKIAIRPDSAFYAWLEQELGRRFDYACTRDLETFRREDRAITPAGQIKAGGDRHEKD HHHHHHHCCCCHHHHHHHHHHHCHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DRHRIDDRSRFVLGWSNEAKIAALQEDDLPRFEARFKELLNENTIREIANFNAQLNKERA HHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH QIRERIATINASLFDIDYNSGRYIELVADTTTDPEVRDFREQLRACTEDTVTGSEDAQYN HHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH ERKFLQVRAIIERFVASVGFVHGEGGCFSLLRHLSIEAYHAEKAIRRAATSG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA